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Fig. 2 | BMC Genomics

Fig. 2

From: Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil

Fig. 2

Gene content analysis of the STM 6070 genome. a: Venn diagram of gene number counts of symbiotic Cupriavidus strains; b: functional COG categories of STM 6070 specific genes (107 assigned genes out of 483). STM 6070, Cupriavidus neocaledonicus STM 6070; STM 6018, C. taiwanensis STM 6018; LMG 19424T, C. taiwanensis LMG 19424T; AMP6, Cupriavidus sp. AMP6; UYPR2.512, Cupriavidus sp. UYPR2.512. Numbers under the strain names describe the total number of genes for each corresponding genome. The analysis was performed using the “Gene Phyloprofile” tool in the Microscope MaGe platform [48], https://www.genoscope.cns.fr/agc/microscope/mage). The orthologous counterparts in the genomes were detected by applying a minimum of 30% for protein sequences identity over a minimum of 80% of the protein length (> 30% protein MinLrap 0.8)

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BMC Genomics

ISSN: 1471-2164

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