Table 2 Summary of simulation parameters
From: Using DenseFly algorithm for cell searching on massive scRNA-seq datasets
Dataset | Note | # cells | # genes | # cell types | Dropout rate |
|---|---|---|---|---|---|
SIM I | – | 2000 | 10,000 | 5 | 0% |
SIM II | Batch 1 | 1000 | 10,000 | 5 | 0% |
SIM II | Batch 2 | 1000 | 10,000 | 5 | 0% |
SIM III | SIM III-0 | 2000 | 10,000 | 5 | 0% |
SIM III | SIM III-1 | 2000 | 10,000 | 5 | 15.44% |
SIM III | SIM III-2 | 2000 | 10,000 | 5 | 25.15% |
SIM III | SIM III-3 | 2000 | 10,000 | 5 | 35.28% |
SIM III | SIM III-4 | 2000 | 10,000 | 5 | 43.41% |
SIM III | SIM III-5 | 2000 | 10,000 | 5 | 53.60% |