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Table 1 This table counts the number of features in the data before and after processing

From: Deep in the Bowel: Highly Interpretable Neural Encoder-Decoder Networks Predict Gut Metabolites from Gut Microbiome

 

Raw

Complete

Summarized

Metabolites

8848 clusters

1692 clusters

143 classes

Bacteria

201 species

191 species

51 genera

  1. Removal of features with mostly zeros reduced the number of metabolite clusters from 8848 to 1692, and the number of bacteria species from 201 to 191. Summarization further reduced the dimensionality to 143 classes and 51 genera
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BMC Genomics

ISSN: 1471-2164

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