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Table 1 Overview of the RNA-seq data from RF and BF at each of the three fruit developmental stages

From: Comparative transcriptome analysis of two contrasting wolfberry genotypes during fruit development and ripening and characterization of the LrMYB1 transcription factor that regulates flavonoid biosynthesis

Sample

Name

Raw Reads

Clean reads

Clean bases

Error (%)

Q20 (%)

Q30 (%)

GC (%)

LbG1

RFS1

46132734

44796750

6.72G

0.02

97.15

92.65

42.97

LbG2

RFS1

47970842

4656150

6.98G

0.02

97.31

92.99

42.86

LbG3

RFS1

45495590

44165234

6.62G

0.02

97.32

92.98

42.91

LbT1

RFS3

51056242

49545044

7.43G

0.02

97.41

93.13

42.26

LbT2

RFS3

50074818

48300496

7.25G

0.02

96.71

91.72

42.06

LbT3

RFS3

48539438

46358492

6.95G

0.02

96.99

92.37

42.06

LbR1

RFS2

48230562

46211844

6.93G

0.02

96.78

91.97

41.59

LbR2

RFS2

47494602

46194950

6.93G

0.02

96.15

90.78

40.49

LbR3

RFS2

43848978

41997634

6.3G

0.02

96.87

92.22

41.31

LrG1

BFS1

53878068

52399006

7.86G

0.02

97.37

93.11

42.71

LrG2

BFS1

50815816

49325838

7.4G

0.02

97.22

92.78

42.99

LrG3

BFS1

49535828

48152026

7.22G

0.02

97.37

93.10

42.90

LrT1

BFS3

53206854

51476830

7.72G

0.02

96.73

91.71

42.42

LrT2

BFS3

49561342

48105208

7.22G

0.02

97.33

93.01

42.49

LrT3

BFS3

49100240

46722298

7.01G

0.02

96.84

92.08

42.35

LrR1

BFS2

50534672

48440070

7.27G

0.02

96.93

92.27

41.83

LrR2

BFS2

49687764

47622698

7.14G

0.02

96.96

92.30

42.01

LrR3

BFS2

51493156

49420204

7.41G

0.02

97.00

92.41

41.92

  1. BF black fruit of L. ruthenicum, RF red fruit of L. barbarum; S1: 10 DAF; S2: 25 DAF; S3: 40 DAF. DAF days after flowering