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Table 4 The location of Rps genes on chromosome 3

From: Fine mapping of a Phytophthora-resistance locus RpsGZ in soybean using genotyping-by-sequencing

No

Rps gene

Molecular marker interval

Physical posistion (bp)

1

RpsGZ

  

4,003,401

–

4,370,772a

2

RpsX

  

2,910,913

–

3,153,254a

3

Rps9

Satt631

Satt152

2,943,883

–

3,366,655a

4

RpsQ

BARCSOYSSR_03_0165

InDel281

2,968,566

–

3,087,579a

5

Rps1a

Satt159

Satt009

3,197,845

–

3,932,116a

6

RpsYu25

Satt152

Sat_186

3,366,405

–

3,488,905a

7

Rps1d

Satt152

Sat_186

3,366,405

–

3,488,905a

8

Rps1

Sat_186

Satt530

3,488,616

–

5,669,877a

9

RpsYD29

SattWM82–50

Satt1 k4b

3,857,715

–

4,062,474b

10

Rps7

Satt009

Satt125

3,931,955

–

18,415,710a

11

Rps gene in Waseshiroge

Satt009

T003044871

3,910,260

–

4,486,048b

12

RpsUN1

BARCSOYSSR_03_0233

BARCSOYSSR_03_0246

4,020,587

–

4,171,402a

13

RpsHN

SSRSOYN-25

SSRSOYN-44

4,227,863

–

4,506,526b

14

Rps1 k

  

4,457,810

–

4,641,921b

15

RpsWY

  

4,466,230

–

4,502,773b

16

Rps gene in E00003

  

4,475,877

–

4,563,799b

17

RpsHC18

BARCSOYSSR_03_0265

BARCSOYSSR_03_0272

4,446,594

–

4,611,282a

18

Rps1b

Satt530

Satt584

5,669,877

–

9,228,144a

19

Rps1c

Satt530

Satt584

5,669,877

–

9,228,144a

  1. a:the nucleotide positions of the markers were determined through a BLAST search in the Glyma 2.0 soybean gene annotation database (http://soybase.org/); b:the nucleotide positions of the markers were determined according to the Glyma 1.0 soybean gene annotation database (http://soybase.or