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Table 4 Classification of Genes in CNVR with evidence of selection

From: Copy number variation in human genomes from three major ethno-linguistic groups in Africa

Type

Observed Count

Count in Ensembl

Ratio Observed: Expected

pseudogene

259

14,975

1.5

protein_coding

184

21,817

0.7

lincRNA

89

7177

1.1

IG_V_gene

25

138

16.1

IG_V_pseudogene

22

187

10.5

antisense

20

5339

0.3

miRNA

19

3243

0.5

snRNA

11

2001

0.5

processed_transcript

9

799

1.0

IG_C_gene

9

14

57.2

misc_RNA

8

2127

0.3

  1. SNP with evidence of selection were annotated with a gene name if they were within 5 kb of the gene start or end. Counts of gene types were based on Ensembl annotation and the Count in Ensembl was the total number of each type recorded in Ensembl Biomart