Table 3 Numbers of deleterious SNPs, indels and corresponded genes in mutant isolates of Puccinia striiformis f. sp. tritici detected from the haplotigs of isolate 11–281
Mutant Isolate | Deleterious SNPs | Deleterious SNPs on genes | Deleterious Indels | Deleterious Indels on genes | Deleterious variants on genes |
|---|---|---|---|---|---|
M11-Yr36–1 | 147 | 85 | 73 | 50 | 124 |
M11-Yr21 | 243 | 125 | 146 | 95 | 192 |
M11-YrTr1 | 211 | 127 | 158 | 92 | 190 |
M11-Yr24–1 | 476 | 215 | 349 | 175 | 326 |
M11-Yr9–2 | 226 | 119 | 123 | 69 | 170 |
M11-Yr17 | 578 | 278 | 250 | 140 | 360 |
M11-Yr39 | 348 | 174 | 227 | 117 | 252 |
M11-Yr10 | 248 | 135 | 165 | 96 | 202 |
M11-YrA+ | 347 | 166 | 217 | 112 | 242 |
M11-Yr9–1 | 218 | 116 | 133 | 78 | 177 |
M11-Fielder | 233 | 116 | 148 | 95 | 183 |
M11-Yr6 | 180 | 99 | 123 | 74 | 154 |
M11-Yr9–4 | 664 | 304 | 383 | 207 | 417 |
M11-Yr1–2 | 806 | 338 | 557 | 252 | 476 |
M11-Yr1–3 | 334 | 184 | 161 | 111 | 259 |
M11-YrSP-1 | 393 | 213 | 261 | 156 | 309 |
M11-Yr2–1 | 777 | 354 | 545 | 264 | 491 |
M11-Yr76–2 | 461 | 235 | 316 | 185 | 352 |
M11-YrExp2 | 392 | 218 | 269 | 157 | 317 |
M11-Yr2–2 | 844 | 363 | 631 | 280 | 522 |
M11-Paha | 714 | 329 | 500 | 244 | 462 |
M11-Yr36–2 | 757 | 338 | 560 | 265 | 493 |
M11-YrSP-2 | 340 | 181 | 228 | 129 | 266 |
M11-Yr76–1 | 140 | 78 | 70 | 44 | 110 |
M11-Yr76–3 | 243 | 125 | 144 | 83 | 189 |
M11-Yr43 | 89 | 59 | 6 | 6 | 65 |
M11-Yr44 | 76 | 46 | 9 | 9 | 49 |
M11-Yr1–1 | 118 | 60 | 10 | 10 | 67 |
M11-Yr8 | 55 | 30 | 9 | 9 | 38 |
M11-Yr31 | 69 | 37 | 7 | 7 | 41 |
Total | 1895 | 564 | 1059 | 401 | 731 |