TY - JOUR AU - Balhorn, R. PY - 2007 DA - 2007// TI - The protamine family of sperm nuclear proteins JO - Genome Biol VL - 8 UR - https://doi.org/10.1186/gb-2007-8-9-227 DO - 10.1186/gb-2007-8-9-227 ID - Balhorn2007 ER - TY - JOUR AU - Steger, K. AU - Balhorn, R. PY - 2018 DA - 2018// TI - Sperm nuclear protamines: A checkpoint to control sperm chromatin quality JO - Anat Histol Embryol VL - 47 UR - https://doi.org/10.1111/ahe.12361 DO - 10.1111/ahe.12361 ID - Steger2018 ER - TY - JOUR AU - Bennetts, L. E. AU - Aitken, R. J. PY - 2005 DA - 2005// TI - A comparative study of oxidative dna damage in mammalian spermatozoa JO - Mol Reprod Dev Inc Gamete Res VL - 71 UR - https://doi.org/10.1002/mrd.20285 DO - 10.1002/mrd.20285 ID - Bennetts2005 ER - TY - JOUR AU - Villani, P. AU - Eleuteri, P. AU - Grollino, M. G. AU - Rescia, M. AU - Altavista, P. AU - Spanò, M. AU - Pacchierotti, F. AU - Cordelli, E. PY - 2010 DA - 2010// TI - Sperm dna fragmentation induced by dnase i and hydrogen peroxide: an in vitro comparative study among different mammalian species JO - Reproduction VL - 140 UR - https://doi.org/10.1530/REP-10-0176 DO - 10.1530/REP-10-0176 ID - Villani2010 ER - TY - JOUR AU - Enciso, M. AU - Johnston, S. D. AU - Gosálvez, J. PY - 2011 DA - 2011// TI - Differential resistance of mammalian sperm chromatin to oxidative stress as assessed by a two-tailed comet assay JO - Reprod Fertil Dev VL - 23 UR - https://doi.org/10.1071/RD10269 DO - 10.1071/RD10269 ID - Enciso2011 ER - TY - JOUR AU - Biegeleisen, K. PY - 2006 DA - 2006// TI - The probable structure of the protamine–dna complex JO - J Theor Biol VL - 241 UR - https://doi.org/10.1016/j.jtbi.2005.12.015 DO - 10.1016/j.jtbi.2005.12.015 ID - Biegeleisen2006 ER - TY - JOUR AU - Queralt, R. AU - Adroer, R. AU - Oliva, R. AU - Winkfein, R. AU - Retief, J. AU - Dixon, G. PY - 1995 DA - 1995// TI - Evolution of protamine p1 genes in mammals JO - J Mol Evol VL - 40 UR - https://doi.org/10.1007/BF00160507 DO - 10.1007/BF00160507 ID - Queralt1995 ER - TY - JOUR AU - Lüke, L. AU - Tourmente, M. AU - Roldan, E. R. PY - 2016 DA - 2016// TI - Sexual selection of protamine 1 in mammals JO - Mol Biol Evol VL - 33 UR - https://doi.org/10.1093/molbev/msv209 DO - 10.1093/molbev/msv209 ID - Lüke2016 ER - TY - JOUR AU - Brewer, L. R. PY - 2011 DA - 2011// TI - Deciphering the structure of dna toroids JO - Integr Biol VL - 3 UR - https://doi.org/10.1039/c0ib00128g DO - 10.1039/c0ib00128g ID - Brewer2011 ER - TY - JOUR AU - Arellano, A. AU - Canales, M. AU - Jullian, C. AU - Brunet, J. E. PY - 1988 DA - 1988// TI - Fluorescence studies on clupein protamines: evidence for globular conformation JO - Biochem Biophys Res Commun VL - 150 UR - https://doi.org/10.1016/0006-291X(88)90439-1 DO - 10.1016/0006-291X(88)90439-1 ID - Arellano1988 ER - TY - JOUR AU - Cid, H. AU - Arellano, A. PY - 1982 DA - 1982// TI - Secondary structure prediction of protamines JO - Int J Biol Macromol VL - 4 UR - https://doi.org/10.1016/0141-8130(82)90003-4 DO - 10.1016/0141-8130(82)90003-4 ID - Cid1982 ER - TY - JOUR AU - Soler-Ventura, A. AU - Gay, M. AU - Jodar, M. AU - Vilanova, M. AU - Castillo, J. AU - Arauz-Garofalo, G. AU - Villarreal, L. AU - Ballescà, J. L. AU - Vilaseca, M. AU - Oliva, R. PY - 2019 DA - 2019// TI - Characterization of human sperm protamine proteoforms through a combination of top-down and bottom-up mass spectrometry approaches JO - J Proteome Res VL - 19 UR - https://doi.org/10.1021/acs.jproteome.9b00499 DO - 10.1021/acs.jproteome.9b00499 ID - Soler-Ventura2019 ER - TY - JOUR AU - Balhorn, R. AU - Corzett, M. AU - Mazrimas, J. AU - Watkins, B. PY - 1991 DA - 1991// TI - Identification of bull protamine disulfides JO - Biochemistry VL - 30 UR - https://doi.org/10.1021/bi00215a026 DO - 10.1021/bi00215a026 ID - Balhorn1991 ER - TY - JOUR AU - Vilfan, I. D. AU - Conwell, C. C. AU - Hud, N. V. PY - 2004 DA - 2004// TI - Formation of native-like mammalian sperm cell chromatin with folded bull protamine JO - J Biol Chem VL - 279 UR - https://doi.org/10.1074/jbc.M312777200 DO - 10.1074/jbc.M312777200 ID - Vilfan2004 ER - TY - JOUR AU - Hutchison, J. M. AU - Rau, D. C. AU - DeRouchey, J. E. PY - 2017 DA - 2017// TI - Role of disulfide bonds on dna packaging forces in bull sperm chromatin JO - Biophys J VL - 113 UR - https://doi.org/10.1016/j.bpj.2017.08.050 DO - 10.1016/j.bpj.2017.08.050 ID - Hutchison2017 ER - TY - JOUR AU - Bench, G. AU - Corzett, M. AU - Kramer, C. AU - Grant, P. AU - Balhorn, R. PY - 2000 DA - 2000// TI - Zinc is sufficiently abundant within mammalian sperm nuclei to bind stoichiometrically with protamine 2 JO - Mol Reprod Dev Inc Gamete Res VL - 56 UR - https://doi.org/3.0.CO;2-M DO - 3.0.CO;2-M ID - Bench2000 ER - TY - JOUR AU - Pfeifer, H. AU - Conrad, M. AU - Roethlein, D. AU - Kyriakopoulos, A. AU - Brielmeier, M. AU - Bornkamm, G. W. AU - Behne, D. PY - 2001 DA - 2001// TI - Identification of a specific sperm nuclei selenoenzyme necessary for protamine thiol cross-linking during sperm maturation JO - FASEB J VL - 15 UR - https://doi.org/10.1096/fj.00-0655fje DO - 10.1096/fj.00-0655fje ID - Pfeifer2001 ER - TY - JOUR AU - Conrad, M. AU - Moreno, S. AU - Sinowatz, F. AU - Ursini, F. AU - Kölle, S. AU - Roveri, A. AU - Brielmeier, M. AU - Wurst, W. AU - Maiorino, M. AU - Bornkamm, G. PY - 2005 DA - 2005// TI - The nuclear form of phospholipid hydroperoxide glutathione peroxidase is a protein thiol peroxidase contributing to sperm chromatin stability JO - Mol Cell Biol VL - 25 UR - https://doi.org/10.1128/MCB.25.17.7637-7644.2005 DO - 10.1128/MCB.25.17.7637-7644.2005 ID - Conrad2005 ER - TY - JOUR AU - Retief, J. D. AU - Rees, J. S. AU - Westerman, M. AU - Dixon, G. H. PY - 1995 DA - 1995// TI - Convergent evolution of cysteine residues in sperm protamines of one genus of marsupials, the planigales JO - Mol Biol Evol VL - 12 ID - Retief1995 ER - TY - JOUR AU - Whittington, A. AU - Parkinson, A. AU - Spencer, P. AU - Grigg, G. AU - Hinds, L. AU - Gallagher, C. AU - Kuchel, P. AU - Agar, N. PY - 1995 DA - 1995// TI - Comparative study of the antioxidant defence systems in the erythrocytes of australian marsupials and monotremes JO - Comp Biochem Physiol Part C Pharmacol Toxicol Endocrinol VL - 110 ID - Whittington1995 ER - TY - JOUR AU - Consortium, U. PY - 2018 DA - 2018// TI - Uniprot: a worldwide hub of protein knowledge JO - Nucleic Acids Res VL - 47 UR - https://doi.org/10.1093/nar/gky1049 DO - 10.1093/nar/gky1049 ID - Consortium2018 ER - TY - JOUR AU - Edgar, R. C. PY - 2004 DA - 2004// TI - Muscle: multiple sequence alignment with high accuracy and high throughput JO - Nucleic Acids Res VL - 32 UR - https://doi.org/10.1093/nar/gkh340 DO - 10.1093/nar/gkh340 ID - Edgar2004 ER - TY - JOUR AU - Bayse, G. S. AU - Michaels, A. W. AU - Morrison, M. PY - 1972 DA - 1972// TI - The peroxidase-catalyzed oxidation of tyrosine JO - Biochim Biophys Acta BBA Enzymol VL - 284 UR - https://doi.org/10.1016/0005-2744(72)90043-5 DO - 10.1016/0005-2744(72)90043-5 ID - Bayse1972 ER - TY - JOUR AU - Heinecke, J. W. PY - 2002 DA - 2002// TI - Tyrosyl radical production by myeloperoxidase: a phagocyte pathway for lipid peroxidation and dityrosine cross-linking of proteins JO - Toxicology VL - 177 UR - https://doi.org/10.1016/S0300-483X(02)00192-0 DO - 10.1016/S0300-483X(02)00192-0 ID - Heinecke2002 ER - TY - JOUR AU - Mai, K. AU - Smith, N. C. AU - Feng, Z. -. P. AU - Katrib, M. AU - Šlapeta, J. AU - Šlapetova, I. AU - Wallach, M. G. AU - Luxford, C. AU - Davies, M. J. AU - Zhang, X. PY - 2011 DA - 2011// TI - Peroxidase catalysed cross-linking of an intrinsically unstructured protein via dityrosine bonds in the oocyst wall of the apicomplexan parasite, eimeria maxima JO - Int J Parasitol VL - 41 UR - https://doi.org/10.1016/j.ijpara.2011.07.001 DO - 10.1016/j.ijpara.2011.07.001 ID - Mai2011 ER - TY - STD TI - Lee J, Ju M, Cho OH, Kim Y, Nam KT. Tyrosine-rich peptides as a platform for assembly and material synthesis. Adv Sci. 2019; 6(4). ID - ref26 ER - TY - JOUR AU - Martinie, R. J. AU - Godakumbura, P. I. AU - Porter, E. G. AU - Divakaran, A. AU - Burkhart, B. J. AU - Wertz, J. T. AU - Benson, D. E. PY - 2012 DA - 2012// TI - Identifying proteins that can form tyrosine-cysteine crosslinks JO - Metallomics VL - 4 UR - https://doi.org/10.1039/c2mt20093g DO - 10.1039/c2mt20093g ID - Martinie2012 ER - TY - JOUR AU - E Kasinsky, H. AU - Maria Eirin-Lopez, J. AU - Ausió, J. PY - 2011 DA - 2011// TI - Protamines: structural complexity, evolution and chromatin patterning JO - Protein Pept Lett VL - 18 UR - https://doi.org/10.2174/092986611795713989 DO - 10.2174/092986611795713989 ID - E Kasinsky2011 ER - TY - JOUR AU - Green, G. AU - Balhorn, R. AU - Poccia, D. AU - Hecht, N. PY - 1994 DA - 1994// TI - Synthesis and processing of mammalian protamines and transition proteins JO - Mol Reprod Dev VL - 37 UR - https://doi.org/10.1002/mrd.1080370303 DO - 10.1002/mrd.1080370303 ID - Green1994 ER - TY - JOUR AU - de Mateo, S. AU - Ramos, L. AU - de Boer, P. AU - Meistrich, M. AU - Oliva, R. PY - 2011 DA - 2011// TI - Protamine 2 precursors and processing JO - Protein Pept Lett VL - 18 UR - https://doi.org/10.2174/092986611795713998 DO - 10.2174/092986611795713998 ID - de Mateo2011 ER - TY - JOUR AU - Lüke, L. AU - Tourmente, M. AU - Dopazo, H. AU - Serra, F. AU - Roldan, E. R. PY - 2016 DA - 2016// TI - Selective constraints on protamine 2 in primates and rodents JO - BMC Evol Biol VL - 16 UR - https://doi.org/10.1186/s12862-016-0588-1 DO - 10.1186/s12862-016-0588-1 ID - Lüke2016 ER - TY - JOUR AU - Bunick, D. AU - Balhorn, R. AU - Stanker, L. H. AU - Hecht, N. B. PY - 1990 DA - 1990// TI - Expression of the rat protamine 2 gene is suppressed at the level of transcription and translation JO - Exp Cell Res VL - 188 UR - https://doi.org/10.1016/0014-4827(90)90290-Q DO - 10.1016/0014-4827(90)90290-Q ID - Bunick1990 ER - TY - JOUR AU - Maier, W. -. M. AU - Nussbaum, G. AU - Domenjoud, L. AU - Klemm, U. AU - Engel, W. PY - 1990 DA - 1990// TI - The lack of protamine 2 (p2) in boar and bull spermatozoa is due to mutations within the p2 gene JO - Nucleic Acids Res VL - 18 UR - https://doi.org/10.1093/nar/18.5.1249 DO - 10.1093/nar/18.5.1249 ID - Maier1990 ER - TY - STD TI - Lüke L, Vicens A, Serra F, Luque-Larena JJ, Dopazo H, Roldan ER, Gomendio M. Sexual selection halts the relaxation of protamine 2 among rodents. PLoS One. 2011; 6(12). ID - ref34 ER - TY - JOUR AU - Capra, J. A. AU - Singh, M. PY - 2007 DA - 2007// TI - Predicting functionally important residues from sequence conservation JO - Bioinformatics VL - 23 UR - https://doi.org/10.1093/bioinformatics/btm270 DO - 10.1093/bioinformatics/btm270 ID - Capra2007 ER - TY - STD TI - Cover TM, Thomas JA. Elements of information theory. 2012. Wiley. ID - ref36 ER - TY - JOUR AU - Hannenhalli, S. S. AU - Russell, R. B. PY - 2000 DA - 2000// TI - Analysis and prediction of functional sub-types from protein sequence alignments JO - J Mol Biol VL - 303 UR - https://doi.org/10.1006/jmbi.2000.4036 DO - 10.1006/jmbi.2000.4036 ID - Hannenhalli2000 ER - TY - JOUR AU - Eirín-López, J. M. AU - Ausio, J. PY - 2009 DA - 2009// TI - Origin and evolution of chromosomal sperm proteins JO - Bioessays VL - 31 UR - https://doi.org/10.1002/bies.200900050 DO - 10.1002/bies.200900050 ID - Eirín-López2009 ER - TY - BOOK AU - Inc, P. T. PY - 2015 DA - 2015// TI - Collaborative data science PB - Plotly Technologies Inc Montral CY - Montreal ID - Inc2015 ER - TY - STD TI - Powell CD, Moseley HN. Entropy Based Analysis of Vertebrate Sperm Protamines Sequences: Evidence of Dityrosine and Cysteine-Tyrosine Cross-Linking in Sperm Protamines. 2019. https://doi.org/10.6084/m9.figshare.10292573.v1. ID - ref40 ER -