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Table 1 sisRNAs identified in GV RNA-seq reads by MACS according to Ensemble and RefSeq genes in Xenopus tropicalis

From: Stable intronic sequence RNAs (sisRNAs) are selected regions in introns with distinct properties

Genome size: 1,513,925,492 bps # Total length % in genome Length distribuion
average min median max
All peaks by MACS (FDR=0.01) 63,410 21,899,763 1.45% 345.4 160 271 2908
sisRNAs by Ensembl genes (28,937) 34,169 12,184,476 0.80% 356.6 160 283 2908
sisRNAs by RefSeq genes (9448) 24,901 9,054,977 0.60% 363.6 160 288 2908