Table 1 sisRNAs identified in GV RNA-seq reads by MACS according to Ensemble and RefSeq genes in Xenopus tropicalis
From: Stable intronic sequence RNAs (sisRNAs) are selected regions in introns with distinct properties
Genome size: 1,513,925,492 bps | # | Total length | % in genome | Length distribuion | |||
|---|---|---|---|---|---|---|---|
average | min | median | max | ||||
All peaks by MACS (FDR=0.01) | 63,410 | 21,899,763 | 1.45% | 345.4 | 160 | 271 | 2908 |
 sisRNAs by Ensembl genes (28,937) | 34,169 | 12,184,476 | 0.80% | 356.6 | 160 | 283 | 2908 |
 sisRNAs by RefSeq genes (9448) | 24,901 | 9,054,977 | 0.60% | 363.6 | 160 | 288 | 2908 |