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Fig. 3 | BMC Genomics

Fig. 3

From: Comparative transcriptomic analysis of global gene expression mediated by (p) ppGpp reveals common regulatory networks in Pseudomonas syringae

Fig. 3

Circular representation of RNA-seq data. The first ring (outside ring) showed PstDC3000 and PssB728a genome. The sky blue region represents homologues genes between PstDC3000 and PssB728a; the height of the plot represents the percentage of sequence identity (40 to 100%). The yellow region represents unique genes of PstDC3000. The pink region represents unique genes of PssB728a. The second ring represents log2 FC of (p)ppGpp0PstDC3000 versus PstDC3000, red and blue bar represent log2FC ≥ 1 and log2FC ≤ -1 with a corrected p value < 0.05, respectively. The third ring shows that the clusters of orthologous groups (COG) of each genes. Difference function classification is represented by 22 colors. The fourth ring represents log2 FC of the (p)ppGpp0PssB728a versus PssB728a, red and blue bar represents log2FC ≥ 1 and log2FC ≤ -1 with a corrected p value < 0.05, respectively

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