Table 3 Summary of the detected MQTLs for YLD, GW, HD, PH, and TN traits in rice under unstressed condition

GW

1

MQTL-GW1

RM3233-C52458s

32.27

3.73

5.05-6.58

7

5

5

175

1

MQTL-GW2

RM3366-RM1349

103.77

2.67

24.26-25.07

5

3

4

108

1

MQTL-GW3

RM1095-RM5914

129.95

2.01

30.92-31.50

2

2

2

77

1

MQTL-GW4

RM3447-RM6618

144.29

3.07

35.25-37.01

7

4

4

221

1

MQTL-GW5

RM8049-RM6831

178.53

3.35

42.07-43.17

2

2

2

165

2

MQTL-GW6

RM452-G243A

49.85

5.97

9.56-11.75

10

6

7

165

2

MQTL-GW7

RM7245-RM221

110.97

6.42

26.44-27.60

2

2

2

147

2

MQTL-GW8

R2216-RM5993

124.58

2.79

28.41-29.70

4

3

3

171

2

MQTL-GW9

RM8030-RM5958

140.25

1.06

32.48-32.83

2

2

2

48

3

MQTL-GW10

R134-RM4512

46.9

5.21

9.49-11.30

3

3

3

271

3

MQTL-GW11

RM6931-C11260S

70.66

2.07

14.98-15.47

7

4

4

37

3

MQTL-GW12

S1466-RM6425

92.12

3.12

22.98-23.82

3

2

2

59

[10]

3

MQTL-GW13

R2462-R63525

136.1

0.8

30.10-30.38

2

2

2

37

4

MQTL-GW14

RM5687-RM6314

34.77

15.5

15.74-18.44

3

2

2

136

4

MQTL-GW15

R278-RM2848

74.44

0.4

23.43-24.49

5

4

4

158

[10]

4

MQTL-GW16

R2737-RM5503

97.98

4.41

29.15-30.17

10

4

4

139

5

MQTL-GW17

S2309-S2136

11.47

3.27

0.94-1.29

2

2

2

47

5

MQTL-GW18

RM7349-RM3322

30.98

2.01

3.24-4.26

5

3

3

106

5

MQTL-GW19

S21985S-E2801S

60.92

6.32

14.54-16.95

3

2

2

181

5

MQTL-GW20

RM6282-E10316S

80.4

5.48

20.24-21.13

6

3

3

103

5

MQTL-GW21

RG470-RM3620

102.11

3.59

23.48-25.20

2

2

2

204

6

MQTL-GW22

R10069S-RM3330

59.06

2.81

10.46-11.06

6

5

5

47

7

MQTL-GW23

RM5100+RM5752

10.75

2.19

2.21-2.56

2

2

2

23

7

MQTL-GW24

R646-RM1048

64.86

11.35

16.96-20.16

6

5

5

261

8

MQTL-GW25

S12665S-C1251S

58.89

5.8

5.80-8.15

3

2

2

139

8

MQTL-GW26

S3680-RM8264

80.09

6.78

18.25-19.83

3

3

3

128

9

MQTL-GW27

C1454-C397

78.8

7.33

9.63-12.28

3

3

3

169

9

MQTL-GW28

S4677S-RM7039

92.53

1.96

13.62-14.68

4

3

3

107

10

MQTL-GW29

RM6144-RM3229

40.14

6.1

15.60-16.69

4

3

3

101

10

MQTL-GW30

RM7300-RM147

61.67

2.23

19.93-20.94

4

2

2

140

11

MQTL-GW31

RM1812-RM1124

22.71

7.29

2.40-3.85

3

2

2

155

11

MQTL-GW32

S20163S-RM3701

38.66

11.35

5.37-8.10

2

2

2

244

11

MQTL-GW33

R10329S-RM4746

69.14

0.86

16.04-16.57

5

2

2

29

12

MQTL-GW34

RM3326-C11001SA

77.56

6.92

21.74-22.45

4

3

3

35

HD

1

MQTL-HD1

C12072S-C52458

31.9

4.1

5.51-6.58

2

2

2

128

2

MQTL-HD2

E50474S-RM3505

32.82

6.81

5.64-7.54

3

2

2

212

2

MQTL-HD3

C1236-R418

117.41

8.35

27.36-28.94

2

2

2

180

2

MQTL-HD4

R685-RG256

134.61

1.2

31.26-33.93

4

4

4

363

3

MQTL-HD5

C51477S-RM6013

5.78

1.85

1.03-1.66

11

8

11

79

3

MQTL-HD6

C68-RM6496

44.5

2.18

9.31-10.14

8

5

5

130

3

MQTL-HD7

RM5626-RM7097

104.68

10.87

24.86-26.87

3

2

2

196

3

MQTL-HD8

R2404-RM3867

142.69

0.59

31.38-31.74

13

8

11

61

4

MQTL-HD9

R2811-RM4835

12.69

8.62

2.08-6.98

3

3

3

225

4

MQTL-HD10

RM6314-S10644

42.81

10.76

18.44-19.04

2

2

2

52

5

MQTL-HD11

S2467-RM3969

69.48

7.81

17.14-18.93

3

2

2

169

5

MQTL-HD12

E60663S-R1714

99.43

26.84

21.14-27.80

2

2

2

874

6

MQTL-HD13

C425A-RM5218

8.38

2.6

1.64-2.36

3

3

3

112

6

MQTL-HD14

RM6836-RM8238

54.49

0.14

9.30-9.45

4

3

3

13

7

MQTL-HD15

RM214-RM7183

50.66

0.3

12.78-14.95

5

5

5

97

7

MQTL-HD16

RM432-RM7087

65.58

0.3

18.95-19.35

4

4

4

29

7

MQTL-HD17

C50171S-RM478

88.85

4.48

24.62-25.94

2

2

2

158

7

MQTL-HD18

S11279-C924

116.89

0.05

29.01-29.21

6

4

5

31

8

MQTL-HD19

E60560S-RZ562

51.31

1.95

4.17-5.42

5

4

4

112

8

MQTL-HD20

RM3181-RM7027

65.87

9.82

7.55-15.84

2

2

2

439

8

MQTL-HD21

RM8264-RM4668

84.77

1.18

19.83-20.53

4

4

4

59

10

MQTL-HD22

RM496-RM590

68.87

2

22.43-23.04

5

4

4

82

11

MQTL-HD23

S20162S-RM6894

36.24

3.59

5.37-5.91

4

4

4

60

PH

1

MQTL-PH1

RM5359-RM6630

41.15

6.65

7.17-8.36

5

3

3

152

1

MQTL-PH2

C1905-E3004S

72.04

5.86

12.64-15.16

2

2

2

184

1

MQTL-PH3

R2374-RM3475

107.61

2.84

25.06-26.04

2

2

2

99

1

MQTL-PH4

RM5461-V176

115.3

1.4

26.90-27.11

3

2

2

25

1

MQTL-PH5

C1459-RM3411

129.19

2.12

30.53-31.31

5

5

5

117

1

MQTL-PH6

RM8278-RM6618

146.15

0.07

36.62-37.01

4

3

3

36

1

MQTL-PH7

RM3442-RM8235

150.9

3.2

38.20-38.43

2

2

2

40

1

MQTL-PH8

RM8049-E60152S

176.16

6.28

42.07-42.68

2

2

2

95

[29]

2

MQTL-PH9

RM6853-RM452

44.24

5.59

8.95-9.56

2

2

2

39

2

MQTL-PH10

S13984-RM599

107.09

5.32

25.62-27.10

3

3

3

186

3

MQTL-PH11

RM6013-R2247

9.16

3.62

1.66-2.48

2

2

2

125

3

MQTL-PH12

RM7249-RM6080

61.25

2.77

12.90-13.93

4

4

4

82

3

MQTL-PH13

C831-S851

147.69

0.65

32.92-33.03

8

7

7

25

4

MQTL-PH14

S10983-RM6314

36.41

1.18

16.77-18.44

4

2

2

82

4

MQTL-PH15

C2043-RM3839

67.33

11.14

20.56-23.90

2

2

2

428

[29]

4

MQTL-PH16

G379B-RZ879B

108.46

4.29

30.63-33.12

2

2

2

359

5

MQTL-PH17

R1436-RZ649

72.97

4.71

18.25-19.54

3

3

3

127

[29]

5

MQTL-PH18

RM3476-R3802S

101.7

2.48

23.84-24.60

3

2

2

107

6

MQTL-PH19

RM5371-RM6782

98.23

0.64

25.82-26.04

5

4

4

26

7

MQTL-PH20

RM214-RM7183

50.65

0.3

12.78-14.95

3

2

2

97

7

MQTL-PH21

RM1135-RM5405

60.21

4.05

16.93-18.58

2

2

2

120

7

MQTL-PH22

RM3555-RM5720

107.11

1.89

27.89-28.66

3

3

3

123

8

MQTL-PH23

E20920S-C1107

60.6

5.56

6.03-8.68

7

5

6

164

8

MQTL-PH24

RM7356-RM210

92.21

1.7

21.28-22.47

2

2

2

101

[29]

9

MQTL-PH25

RM1189-RM7048

103.29

3.16

16.27-16.93

4

3

3

80

10

MQTL-PH26

RM3311-RM8201

22.39

6.64

10.62-13.76

2

2

2

204

[29]

10

MQTL-PH27

RM5304-S11014

45.45

8.06

16.34-17.98

3

3

3

164

12

MQTL-PH28

C11001SA-R10289S

82.7

7.6

22.45-23.06

2

2

2

60

YLD

1

MQTL-YLD1

RG246-T96

21.31

8.24

3.50-4.44

2

2

2

122

[28]

1

MQTL-YLD2

C1905-C45

71.67

5.43

12.64-14.79

3

3

3

154

[28]

1

MQTL-YLD3

RM5919-RM3475

106.72

6.72

24.73-26.04

3

3

3

146

[28]

1

MQTL-YLD4

RM7414-RM3336

120.29

5.52

27.17-28.61

2

2

2

192

1

MQTL-YLD5

RM8061-RM6950

139.01

0.03

34.12-34.50

6

5

5

44

2

MQTL-YLD6

RM7413-RM8254

69.29

11.41

18.45-19.74

2

2

2

132

[28, 29]

2

MQTL-YLD7

RM6933-RM3857

128.89

8.94

29.30-31.84

5

3

3

264

[29]

3

MQTL-YLD8

S13802-C2184A

44.79

3.92

9.24-10.39

2

2

2

183

3

MQTL-YLD9

C1186-G144

68.71

2.3

14.55-15.33

2

2

2

71

[28]

3

MQTL-YLD10

RM5864-RZ403

90.64

3

22.39-23.08

3

3

3

49

[28, 29]

3

MQTL-YLD11

S10209-S11669

127.52

3.48

27.82-29.55

3

3

3

205

4

MQTL-YLD12

E30341S-RM471

32.96

8.12

16.28-18.82

2

2

2

152

4

MQTL-YLD13

RM3337-RM3839

69.02

7.93

21.73-23.90

2

2

2

310

[29]

6

MQTL-YLD14

E4392S-RM439

109.26

4.78

27.37-29.62

3

3

3

275

[29]

7

MQTL-YLD15

RM432-RM2966

66.59

4.89

18.95-19.73

3

3

3

65

[28]

8

MQTL-YLD16

E31128S-E2623S

70.14

5.57

11.58-17.51

3

3

3

258

8

MQTL-YLD17

G1073A-RG1

89.53

4.71

20.66-21.64

2

2

2

93

9

MQTL-YLD18

C397-S1824

85.91

4.14

12.28-13.63

2

2

2

98

[29]

11

MQTL-YLD19

S10207-R120

59.93

8.03

9.06-14.95

3

3

3

247

[28, 29]

TN

1

MQTL-TN1

RM522-C52458

31.76

6.52

5.24-6.58

3

2

2

158

1

MQTL-TN2

RM3614-S10712

127.12

2.46

29.82-31.36

3

3

3

247

2

MQTL-TN3

C41-RM6617

98.74

1.17

24.52-24.76

4

4

4

28

3

MQTL-TN4

RM1022-C68

39.95

5.93

7.23-9.31

5

5

5

257

3

MQTL-TN5

C60318S- RM6425

87.26

12.69

16.78-23.82

2

2

2

475

[29]

4

MQTL-TN6

S733-R738

90.92

5.95

27.86-28.90

2

2

2

119

6

MQTL-TN7

RM253-RG213

27.32

2.97

5.42-6.28

2

2

2

100

7

MQTL-TN8

RM432-RM2966

66.38

4.44

18.95-19.73

3

2

2

65

8

MQTL-TN9

RM5767-RM1578

84.18

10.44

18.81-20.97

3

3

3

182

9

MQTL-TN10

RM6543-C11503S

115.41

11.29

17.75-19.88

2

2

2

317