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Table 1 Characteristics of MIOX gene family in tomato

From: Genome-wide analysis of Myo-inositol oxygenase gene family in tomato reveals their involvement in ascorbic acid accumulation

Gene name

Annotated locus-1

Unigene Number

Chr-2

CDS-3

AA-4

Pls-5

MW (kDa)-6

Localization predicted by PSORT-7

Location

Strand

SlMIOX1

Solyc06g062430

SGN-U588655

6

999

332

5.03

38.53

cyto: 7, nucl: 3, chlo: 2, mito: 1

SL4.0ch06:37032305..37035813

–

SlMIOX2

Solyc10g005400

SGN-U588654

10

1053

350

5.68

40.87

chlo: 6, mito: 4.5, cyto_mito: 3, nucl: 2

SL4.0ch10:189928..191479

–

SlMIOX3

Solyc11g006570

–

11

756

251

4.99

28.87

cyto: 8.5, cyto_E.R.: 5, nucl: 3, cysk: 1

SL4.0ch11:1245801..1247489

–

SlMIOX4

Solyc12g008650

SGN-U565448

12

954

317

5.09

37.13

cysk: 8, cyto: 4, nucl: 1

SL4.0ch12:2075407..2079388

–

SlMIOX5

Solyc12g098120

SGN-U588652

12

870

289

5.51

34.09

cyto: 8, nucl: 4, pero: 1

SL4.0ch12:65291322..65292191

+

  1. 1. The International Tomato Annotation Group (ITAG) annotates number
  2. 2. Chromosome number in which the gene resides
  3. 3. Length of the coding region in base pairs
  4. 4. Number of amino acids of the deduced amino acid sequence
  5. 5. PIs, theoretical isoelectric point
  6. 6. MW, molecular weight, Kda
  7. 7. PSORT: https://www.genscript.com/tools/wolf-psort; Cyto cytosol; ER endoplasmic reticulum; Vacu vacuolar membrane; Chlo chloroplast; Nucl nuclear; Extr extracellular; Mito mitochondria; Cysk cytoskeleton; Plas plasma membrane; −, not named