Skip to main content

Table 2 Top 10 known up- and down-regulated differently expressed genes (DEGs) in LRFI group

From: Identification of key genes and pathways associated with feed efficiency of native chickens based on transcriptome data via bioinformatics analysis

Gene symbolLog2FCP-valueFDRaDescriptionHRFI vs LRFI
C24H11orf3410.095.26E-040.033Chromosome 24 C11orf34 homologup
FCGBP5.772.85E-050.010Fc fragment of IgG binding proteinup
GUCA2B5.277.40E-040.035Guanylate cyclase activator 2Bup
MUC24.431.59E-040.019Mucin 2, oligomeric ucus/gel-formingup
CDHR24.031.16E-030.042Cadherin related family member 2up
BFSP11.872.45E-040.024Beaded filament structural protein 1up
ND21.784.23E-050.012NADH dehydrogenase subunit 2up
CYTB1.761.22E-050.007Cytochrome bup
ND41.682.95E-050.010NADH dehydrogenase subunit 4up
LOC1017482071.687.03E-040.034Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-likeup
AICDA−5.051.44E-040.018Activation induced cytidine deaminasedown
LOC107049096−5.091.42E-050.007GTPase IMAP family member 8-likedown
TLX2−5.252.43E-040.024T-cell leukemia homeobox 2down
LOC112531272−5.431.02E-050.006Osteoclast-associated immunoglobulin-like receptordown
LOC107050476−5.838.96E-060.006Uncharacterized LOC107050476down
TMEM150B−6.271.41E-030.045Transmembrane protein 150Bdown
LECT2−6.649.11E-040.038Leukocyte cell derived chemotaxin 2down
LOC429329−6.881.11E-030.041Solute carrier family 30 member 2down
SLC30A2−6.881.27E-030.043T-cell-interacting, activating receptor on myeloid cells protein 1-likedown
RHNO1−7.571.29E-040.017RAD9-HUS1-RAD1 interacting nuclear orphan 1down
  1. a FDR false discovery rate