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Table 1 Differentially expressed genes between blue, green and red color phenotypes of Oophaga pumilio previously linked to coloration

From: Being red, blue and green: the genetic basis of coloration differences in the strawberry poison frog (Oophaga pumilio)

rank gene transcripts q-val expression-pattern pigmentation role
88 dgat2 4 0.000 GREEN > RED = BLUE carotenoid metabolism
102 rdh16 4 0.000 BLUE = GREEN > RED carotenoid metabolism
145 scarb1 1 0.000 RED > BLUE > GREEN carotenoid metabolism
371 rdh10 2 0.000 BLUE > RED = GREEN carotenoid metabolism
691 bco2 6 0.002 BLUE > RED = GREEN carotenoid metabolism
969 dhrs3 1 0.005 GREEN > RED = BLUE carotenoid metabolism
1124 aldh1a1 7 0.008 BLUE = GREEN > RED carotenoid metabolism
240 adsl 8 0.000 GREEN > RED = BLUE guanine synthesis in iridophores
525 psat1 4 0.001 BLUE > RED = GREEN guanine synthesis in iridophores
1807 gmps 7 0.024 RED = GREEN > BLUE guanine synthesis in iridophores
1871 fh 5 0.025 RED > GREEN > BLUE guanine synthesis in iridophores
12 camk2g 6 0.000 RED = GREEN > BLUE melanin synthesis
91 gnai1 7 0.000 RED > GREEN > BLUE melanin synthesis
98 ctnnb1 13 0.000 GREEN > RED = BLUE melanin synthesis
197 raf1 8 0.000 RED = GREEN > BLUE melanin synthesis
481 wnt9a 3 0.001 RED > GREEN > BLUE melanin synthesis
521 adcy6 4 0.001 RED > GREEN > BLUE melanin synthesis
771 wnt11 3 0.003 BLUE > GREEN > RED melanin synthesis
797 nras 3 0.003 BLUE = GREEN > RED melanin synthesis
1718 camk2d 4 0.022 BLUE = GREEN > RED melanin synthesis
1939 ep300 4 0.027 RED > GREEN > BLUE melanin synthesis
2036 plcb4 9 0.031 BLUE > RED = GREEN melanin synthesis
2100 wnt10b 6 0.032 RED > GREEN > BLUE melanin synthesis
2571 oca2 3 0.048 BLUE > RED = GREEN melanin synthesis
2620 adcy3 2 0.050 BLUE > GREEN > RED melanin synthesis
119 xdh 9 0.000 RED = GREEN > BLUE pteridine synthesis
853 spr 2 0.004 RED > GREEN > BLUE pteridine synthesis
975 pts 2 0.005 GREEN > RED = BLUE pteridine synthesis
1282 sox9 4 0.010 GREEN > RED = BLUE chromatophore differentiation
167 atp12a 10 0.000 BLUE > RED = GREEN chromatophore differentiation
280 hps3 14 0.000 BLUE > GREEN > RED chromatophore differentiation
1509 hps4 5 0.016 BLUE > RED = GREEN chromatophore differentiation
2260 hps1 8 0.037 BLUE > GREEN > RED chromatophore differentiation
2176 myo5a 2 0.034 RED > GREEN > BLUE chromatophore differentiation
1180 slc7a11 2 0.009 GREEN > RED = BLUE chromatophore differentiation
316 med1 7 0.000 RED > GREEN > BLUE chromatophore differentiation
32 egfr 7 0.000 BLUE = GREEN > RED chromatophore differentiation
55 sult2b1 5 0.000 BLUE > RED = GREEN chromatophore differentiation
128 nf1 19 0.000 RED = GREEN > BLUE chromatophore differentiation
327 gpr161 5 0.000 RED = GREEN > BLUE chromatophore differentiation
337 fos 4 0.000 RED = GREEN > BLUE chromatophore differentiation
453 gnpat 10 0.001 BLUE > RED = GREEN chromatophore differentiation
457 mpzl3 1 0.001 RED > BLUE > GREEN chromatophore differentiation
487 srm 5 0.001 RED > BLUE > GREEN chromatophore differentiation
491 atp6v1h 3 0.001 RED > BLUE > GREEN chromatophore differentiation
572 mfsd12 5 0.001 BLUE > RED = GREEN chromatophore differentiation
611 cog4 14 0.001 BLUE > RED = GREEN chromatophore differentiation
641 dst 11 0.002 BLUE > GREEN > RED chromatophore differentiation
666 oat 4 0.002 BLUE > RED = GREEN chromatophore differentiation
722 slc24a4 5 0.002 BLUE = GREEN > RED chromatophore differentiation
813 mbtps1 6 0.003 BLUE > GREEN > RED chromatophore differentiation
1022 mlana 5 0.006 BLUE > RED = GREEN chromatophore differentiation
1053 herc2 13 0.006 RED > GREEN > BLUE chromatophore differentiation
1130 adrb1 4 0.008 RED > GREEN > BLUE chromatophore differentiation
1270 casp3 3 0.010 BLUE = RED > GREEN chromatophore differentiation
1271 dock7 2 0.010 BLUE > GREEN > RED chromatophore differentiation
1388 atrn 4 0.013 RED > BLUE > GREEN chromatophore differentiation
1457 ece1 6 0.015 BLUE > RED = GREEN chromatophore differentiation
2086 mgrn1 3 0.032 GREEN > RED = BLUE chromatophore differentiation
2118 med12 6 0.033 RED > GREEN > BLUE chromatophore differentiation
2141 atp6v1e1 3 0.033 RED > BLUE > GREEN chromatophore differentiation
2438 edn3 5 0.043 GREEN > RED = BLUE chromatophore differentiation
2439 gfpt1 4 0.043 RED = GREEN > BLUE chromatophore differentiation
2468 pnp 3 0.044 BLUE = RED > GREEN chromatophore differentiation
2500 sf3b1 6 0.045 BLUE > RED = GREEN chromatophore differentiation
2592 rtf1 1 0.049 BLUE = RED > GREEN chromatophore differentiation
2134 impdh2 5 0.033 BLUE > RED = GREEN chromatophore differentiation
800 pax7 1 0.003 GREEN > RED = BLUE chromatophore differentiation
  1. For each gene, the number of transcripts compared, q-value, expression pattern and color-associated function are presented. The expression pattern represents the observed differences in mean transcript counts aggregated by gene and color morphs (see Fig. 2)