Table 4 Overview of the annotation of the P. tenuiflora genome

Transposable

DNA

81,228,002

7.34

Elements

LINE

33,892,567

3.06

SINE

154,638

0.01

LTR

580,518,664

52.43

Unknown

4,544,534

0.41

Total

691,362,441

62.44

Types/Copies

Total Length (bp)

% of Genome^a

Non-coding

miRNA (1376)

171,853

0.015522

RNAs

tRNA (692)

52,086

0.004704

rRNA (68)

14,130

0.001276

snRNA (702)

83,103

0.007506

Protein-coding

Predicted

Supported by

Supported by

Function

Genes

Transcriptome

Homologs

Assigned

39,725

26,529

33,316

39,470 (99.4%)