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Table 1 Genomes List

From: Genomic characterization of Lactobacillus fermentum DSM 20052

StrainSequence LengthGC%#Sequences#PlasmidsAccessionIsolation
DSM 200521,887,97452.50%10CP040910Fermented beets
MTCC 250671,954,69451.50%11NZ_AP017973.1Fermented Milk
VRI-0031,949,29752.10%10CP020353.1Commercial Probiotic
IMD0 130,1012,089,20251.50%10LT906621.1Sourdough
IFO 39562,098,68551.50%10NC_010610Fermented plant material
CECT 57162,100,44951.50%10NC_017465Human milk
F-62,064,62051.70%10NC_021235Unknown
38722,297,85150.70%11NZ_CP011536Milk
NCC29701,949,87452.20%10NZ_CP017151Unknown
47–72,098,68552.50%10NZ_CP017712Unknown
SNUV1752,176,67851.50%13NZ_CP019030Human vagina
FTDC 83122,239,92151.00%10NZ_CP021104.1Human feces
LAC FRN-922,063,60651.80%10NZ_CP021790.1Human oral
LfQi62,098,51052.50%10NZ_CP025592.1Human microbiome
HFB3 51.80%70LJFJ00000000.1Human gut
28–3-CHN 52.20%420NZ_ACQG00000000Human
39 51.60%550NZ_LBDG00000000Unknown
L930BB 52.10%720NZ_CBUR000000000Human intestine
222 52.10%730NZ_CBZV000000000Cocoa bean
RI-508 52.20%740NZ_MKGE00000000.1Cacao bean fermentation
MD IIE-4657 52.30%740NZ_PTLW00000000.1Silage
S6 52.30%820NZ_FUHZ00000000.1Unknown
S13 52.30%850NZ_FUHY00000000.1Unknown
90 TC-4 51.90%930NZ_LBDH00000000Unknown
SHI-2 52.10%930NZ_NJPQ00000000.1Human saliva
DSM 20055 52.40%1020NZ_JQAU00000000Human Saliva
UC0-979C 51.90%1080NZ_LJWZ00000000Human gastric
279 52.00%1080NZ_PGGI00000000.1Human feces
103 51.80%1100NZ_PGGE00000000.1Human cecum
311 51.80%1110NZ_PGGJ00000000.1Human feces
MTCC 8711 49.70%1167NZ_AVAB00000000Yogurt
CECT 9269 51.70%1290NZ_OKQY00000000.1Tocosh
LfU21 51.70%1310NZ_PNBB00000000.1Human feces
NB-22 51.80%1370NZ_AYHA00000000Human vagina
NCDC 400 51.60%1380NZ_PDKX00000000.1Curd
BFE 6620 52.10%1490NZ_NIWV00000000.1Gari
779_LFER 52.10%1690NZ_JUTH00000000Unknown
Lf1 52.60%2500NZ_AWXS00000000Human gut
  1. Genomic features of 38 L. fermentum strains used in this study