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Table 1 Statistics of RNA-seq data for all samples

From: Homoeolog expression bias and expression level dominance (ELD) in four tissues of natural allotetraploid Brassica napus

Species

Tissues

Samplesa

Total clean reads (M)

Clean reads Q20 (%)

Clean reads Q30 (%)

Uniquely mapping genome ratio (%)

B. rapa

Stems

RS1

42.68

99.02

96.94

87.27

RS2

42.43

99.01

96.91

86.92

RS3

42.15

99.03

96.96

84.93

Leaves

RL1

42.51

99.04

97

82.29

RL2

42.64

98.99

96.89

84.39

RL3

42.23

98.89

96.69

79.82

Flowers

RF1

43.00

99.21

97.3

87.85

RF2

43.09

99.23

97.34

87.87

RF3

43.12

99.24

97.43

87.77

Siliques

RQ1

42.08

99.02

96.94

86.61

RQ2

42.45

99.01

96.91

86.13

RQ3

42.63

99.03

96.96

84.23

B. oleracea

Stems

OS1

43.11

98.02

93.9

63.56

OS2

42.22

98.08

94.05

65.37

OS3

42.11

98.14

94.22

63.25

Leaves

OL1

42.43

98.02

93.89

64.63

OL2

42.47

98.88

96.26

65.40

OL3

42.58

98.9

96.29

64.51

Flowers

OF1

42.09

98.9

96.33

63.96

OF2

43.24

98.9

96.3

63.26

OF3

42.94

98.94

96.41

63.38

Siliques

OQ1

42.93

98.02

93.9

62.90

OQ2

42.12

98.08

94.05

63.20

OQ3

42.04

98.14

94.22

63.34

B. napus

Stems

NS1

43.01

99.04

96.76

59.63

NS2

42.57

99

96.63

61.55

NS3

43.26

99.04

96.75

62.20

Leaves

NL1

41.60

99.33

97.7

67.86

NL2

43.15

99.31

97.69

66.16

NL3

40.66

99.3

97.66

66.47

Flowers

NF1

43.18

99.05

96.79

64.29

NF2

42.17

99.04

96.76

64.62

NF3

40.73

99.02

96.69

66.11

Siliques

NQ1

42.69

99.04

96.76

62.36

NQ2

43.07

99

96.63

61.72

NQ3

42.55

99.04

96.75

61.48

  1. a1, 2 and 3 represented three biological replicates