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Table 1 The co-differentially expressed genes between LD and AA tissues

From: The whole-transcriptome landscape of muscle and adipose tissues reveals the ceRNA regulation network related to intramuscular fat deposition in yak

ID

Differentially expressed genes in LD aging

Differentially expressed genes in AA aging

0.5-LDa

2.5-LDb

log2(FC)c

P-value

FDR

0.5-AAd

2.5-AAe

log2(FC)

P-value

FDR

Symbol

TCONS_00004555

0.840

0.001

−9.714

0.000

0.016

0.001

0.707

9.465

0.000

0.043

GNA12

TCONS_00014807

0.001

1.130

10.142

0.000

0.000

0.001

1.530

10.579

0.000

0.000

AUTS2

TCONS_00019781

0.001

1.383

10.434

0.000

0.005

1.040

0.001

−10.022

0.000

0.043

XAB2

TCONS_00055593

0.033

6.587

7.626

0.000

0.000

2.513

0.001

−11.295

0.000

0.017

RGMB

TCONS_00062820

0.001

0.987

9.946

0.000

0.016

29.180

2.817

−3.373

0.000

0.007

PRKCA

XM_005888988.2

0.001

3.813

11.897

0.000

0.000

0.001

0.713

9.478

0.000

0.000

ACADL

XM_005889058.2

0.001

1.330

10.377

0.000

0.000

0.001

0.450

8.814

0.000

0.002

ELOVL7

XM_005890693.1

0.001

0.337

8.396

0.000

0.029

3.397

0.001

−11.730

0.000

0.020

HIF1A

XM_005891509.1

0.953

0.001

−9.897

0.000

0.012

0.001

1.893

10.887

0.000

0.000

ACACB

XM_005892055.2

6.423

53.737

3.065

0.000

0.000

0.001

1.890

10.884

0.000

0.016

SCD

XM_005905364.2

16.140

67.330

2.060

0.000

0.019

1.030

8.033

2.963

0.000

0.008

FASN

XM_005906559.1

0.001

0.773

9.595

0.000

0.000

6.443

0.001

−12.654

0.000

0.000

SMAD1

XM_005907329.1

0.580

0.001

−9.179

0.000

0.000

0.630

0.001

−9.299

0.000

0.043

SIRT1

XM_005910150.2

0.001

2.177

11.088

0.000

0.000

1.360

0.001

−10.409

0.000

0.000

MAP 4 K1

XM_014479307.1

0.001

0.460

8.845

0.000

0.040

0.001

2.873

11.489

0.000

0.029

ZNF41

XM_014480300.1

0.001

0.737

9.525

0.000

0.005

338.727

19.580

−4.113

0.000

0.007

LPL

  1. a0.5-LD: 0.5-year-old longissimus dorsi muscle tissues
  2. b2.5-LD: 2.5-year-old longissimus dorsi tissues
  3. cFC: FPKM fold change between different groups
  4. d0.5-AA: 0.5-year-old adjacent adipose tissues
  5. e2.5-AA: 2.5-year-old adjacent adipose tissues