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Table 1 Homozygous regions significantly enriched in low-fertility Holstein bulls

From: Whole-genome homozygosity mapping reveals candidate regions affecting bull fertility in US Holstein cattle

Chr.

Start (bp)

End (bp)

P-value

t-value

Candidate Genes

2

122,242,657

125,425,072

2.5 × 10− 04

− 0.57

TAF12, PAFR, RF00026

5

85,191,780

85,569,862

9.9 × 10− 05

−6.18

7

46,103,009

49,396,693

6.5 × 10−05

−7.68

DDX46, CATSPER3, TGFB1, SMAD, PKD2L2

8

44,817,928

45,351,612

2.2 × 10−04

−8.56

PIP5K1B, FXN, TJP2

10

68,307,915

71,956,178

8.1 × 10−05

−2.28

ARID4A, TOMM20L, DAAM1

13

26,260,323

27,088,377

4.1 × 10−04

−10.74

MYO3A, GAD2

17

59,986,109

60,771,002

2.7 × 10−05

−14.23

TBX3, TBX5

23

2,352,780

4,018,158

1.9 × 10−05

−3.16

25

32,215,384

32,240,080

6.9 × 10−05

−10.74