Fig. 8

Weighted gene co-expression network analysis (WGCNA) of differentially expressed TFs. a. Cluster dendrogram of TFs based on expression levels during disease response stages. Each branch represents a gene and each color below represents a gene co-expression module. b. Correlation of transcription factor expression patterns at different time points (0, 1, and 5 dpi). The expression patterns of seven modules are shown by the heatmap. The color bar indicates expression levels from low (blue) to high (red). c. Distribution of transcription factor families in different WGCNA modules. MEturquoise: 0dpi; MEbrown: 1dpi; MEblue: 5dpi. Each color represents a co-expression module, and the numbers indicate the number of TFs in the module. d. Transcription factor families highly expressed during different disease response stages (0, 1, and 5 dpi)