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Fig. 3 | BMC Genomics

Fig. 3

From: De novo transcriptome in roots of switchgrass (Panicum virgatum L.) reveals gene expression dynamic and act network under alkaline salt stress

Fig. 3

Correlation analysis between modules and physiological traits by WGCNA (b), and eigengenes expression patterns of 20 modules of WGCNA clustering (b). Each row corresponds to a clustering module, each column corresponds to a physiological trait, the colour of each grid at the row-column intersection indicates the correlation between the module and physiological data, red represents a positive correlation, blue represents a negative correlation, and the number in each grid represents the correlation coefficient and the P value. Twenty modules were marked with numeric value. 1: antiquewhite4; 2: bisque4; 3: blue; 4: brown; 5: coral2; 6: cyan; 7: darkmagenta; 8: darkorange; 9: darkseagreen4; 10: darkslateblue; 11: honeydew; 12: lightcyan; 13: lightsteelblue; 14: lightsteelblue1; 15: mediummorchid; 16: mediumpurple3; 17: midnightblue; 18: skyblue2; 19: white; 20: yellowgreen. In each module, red represents up-regulation and green represents down-regulation. The following corresponds to the degree of up-and-down adjustment of 18 samples in 6 groups (S0, S6, S24, T0, T6, T24)

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