Skip to main content

Table 2 Summary of the transcriptome data from the PacBio Sequel platform

From: BSR-Seq analysis provides insights into the cold stress response of Actinidia arguta F1 populations

Item

Number

Number of CCS reads

1,542,084

Average of CCS read length

2551

Full-length reads

1,170,272

FLNC reads

1,162,834

Average FLNC read length

2415

Consensus reads

515,285

Subreads base (G)

28.33

Average subreads length

2025 bp

N50

2836 bp

Total unigenes annotated in at least one database (NR, NT, KOG, Swissprot, Pfam, GO, KEGG)

27,824

Total unigenes

28,496

  1. CCS: circular consensus sequences, FLNC: full-length nonchimera, GO: Gene Ontology, KEGG: Kyoto Encyclopedia of Genes and Genomes, KO: KEGG Ortholog database, KOG: euKaryotic Orthologous Groups, Nr: NCBI nonredundant protein sequences, Nt: NCBI nonredundant nucleotide sequences, Pfam: Protein family