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Fig. 1 | BMC Genomics

Fig. 1

From: GCSscore: an R package for differential gene expression analysis in Affymetrix/Thermo-Fisher whole transcriptome microarrays

Fig. 1

Comparison of GCSscore and Sscore methods. a Results for original Sscore algorithm (y-axis) and the GCSscore algorithm, using the PM-MM background correction method (x-axis). b Comparison of total averaged GCSscores (AvgSs) on the 3′ IVT array, Mouse Genome 430 2.0 assay, for the GC-based background correction (x-axis) and the legacy PM-MM method (y-axis). The red lines denote the thresholds for significant Sscores (|AvgSs| > 1.8)

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