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Fig. 4 | BMC Genomics

Fig. 4

From: Uncovering the genetic mechanisms regulating panicle architecture in rice with GPWAS and GWAS

Fig. 4

Boxplot of the 4 traits phenotypic variation in the whole population and subgroups. a Total spikelets number per panicle (TSNP) in the whole population. b TSNP in subgroups. c Grain number per panicle (GNP) in the whole population. d GNP in subgroups. e Empty grain number per panicle (EGNP) in the whole population. f EGNP in subgroups. g Seed setting rate (SSR) in the whole population. h SSR in subgroups. The bold lines in the middle represent the median values, the box edges represent the 0.25 and 0.75 quantiles, whiskers represent 1.5 times the interquartile range of the trait data, and points represent outliers. Differences between haplotypes were statistically analyzed using Wilcoxon test by R (*: p < 0.05; **: p < 0.01; ***: p < 0.001; ****: p < 0.0001). The numbers of plants carrying Hap. a, Hap. b, Hap. c, and Hap. d are shown in Supplementary Table 6

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