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Table 11 Five most frequently occurring genus in each community and each response (second analysis of David’s data)

From: Hierarchical non-negative matrix factorization using clinical information for microbial communities

Label

Post

Pre

Community

1

2

1

2

 

EscherichiaShigella

Bacteroides

Bacteroides

Bacteroides

 

Bacteroides

Faecalibacterium

Butyrivibrio

Faecalibacterium

 

Anaerostipes

Lachnospiraceae

Alistipes

Coprococcus_2

 

Blautia

Anaerostipes

Faecalibacterium

Alistipes

 

Salmonella

Phascolarctobacterium

Ruminococcus_2

Ruminococcus_2