Skip to main content

Table 1 Statistics of Paspalum notatum assemblies

From: A study of the heterochronic sense/antisense RNA representation in florets of sexual and apomictic Paspalum notatum

Statistics Assemblies
de novo with Roche 454/FLX + as guiding reference de novo without reference GTAa
Sex Apo Sex Apo All
Number of contigs 80,177 79,040 100,114 103,699 199,074
%GC 50.32 49.82 48.60 48.17 48.73
Median contig length 781 791 980 903 897
Average contig 1012.51 1023.35 1285.99 1186.29 1182.31
N50 1199 1218 1696 1528 1508
Number of contigs 81,179,923 80,885,743 128,745,833 123,016,839 235,450,926
  1. aGlobal transcriptome assembly