Table 2 Top 20 DE genes from a multi-species transcriptome meta-analysis. RNA-seq data from five different cell types from four different vertebrate species after retinoic acid exposure were subjected to differential expression analysis and used as input for a meta-analysis
Symbol | LFC | p-value |
|---|---|---|
SKAP1 | 1.999 | 7.44 × 10−6 |
SLCO2B1 | 1.671 | 7.51 × 10− 6 |
GDNF | 2.144 | 7.52 × 10− 5 |
SMAD3 | 1.111 | 4.93 × 10− 4 |
GP5 | 3.264 | 6.99 × 10− 4 |
HIVEP2 | 4.400 | 7.56 × 10− 4 |
HIC1 | 5.389 | 1.49 × 10− 3 |
CYP26A1 | 3.601 | 1.67 × 10− 3 |
MIR6566 | 1.472 | 2.34 × 10− 3 |
ETS2 | 1.700 | 2.75 × 10− 3 |
TDRD9 | 1.487 | 3.16 × 10− 3 |
ERMN | 3.539 | 3.84 × 10− 3 |
COL24A1 | 2.356 | 4.13 × 10− 3 |
TTYH3 | 1.072 | 4.25 × 10− 3 |
NOTCH2 | 1.276 | 4.40 × 10− 3 |
GPR61 | 1.196 | 5.13 × 10− 3 |
ADAM28 | 1.826 | 5.30 × 10− 3 |
KCNIP1 | 5.450 | 5.33 × 10− 3 |
NOXA1 | 1.309 | 5.65 × 10− 3 |
STXBP4 | 2.781 | 6.31 × 10− 3 |