Skip to main content
Fig. 4 | BMC Genomics

Fig. 4

From: WASP: a versatile, web-accessible single cell RNA-Seq processing platform

Fig. 4

Examples of WASP post-processing analyses. a 2D UMAP plot of clustered cells with detailed information about a selected cell. b After starting the Shiny web application in manual mode, users have to select a threshold defining below which number of UMI counts a cell is discarded. c The elbow plot showing the standard deviation of each principal component and a calculated recommended cutoff (red dot and arrow) for use in the following analyses. Users can select custom values for the clustering resolution and the number of principial components used for the following analysis steps

Back to article page
\