Table 4 Prediction of RNA editing sites
From: Assembly and comparative analysis of the complete mitochondrial genome of Suaeda glauca
Type | RNA -editing | Number | Percentage |
|---|---|---|---|
hydrophobic | CCA (P) = > CTA (L) | 20 | 31.02% |
CCG (P) = > CTG (L) | 14 | ||
CCC (P) = > CTC (L) | 7 | ||
CCT (P) = > CTT (L) | 6 | ||
CCC (P) = > TTC (F) | 2 | ||
GCC (A) = > GTC (V) | 3 | ||
GCG (A) = > GTG (V) | 2 | ||
GCT (A) = > GTT (V) | 1 | ||
GCA (A) = > GTA (V) | 1 | ||
CTT (L) = > TTT (F) | 8 | ||
CTC (L) = > TTC (F) | 3 | ||
hydrophilic | CAT (H) = > TAT (Y) | 8 | 11.11% |
CAC (H) = > TAC (Y) | 4 | ||
CGT (R) = > TGT (C) | 10 | ||
CGC (R) = > TGC (C) | 2 | ||
hydrophobic-hydrophilic | CCT (P) = > TCT (S) | 9 | 11.11% |
CCA (P) = > TCA (S) | 8 | ||
|  | CCC (P) = > TCC (S) | 7 | |
hydrophilic-hydrophobic | CGG (R) = > TGG (W) | 15 | 45.83% |
TCC (S) = > TTC (F) | 11 | ||
TCT (S) = > TTT (F) | 9 | ||
TCA (S) = > TTA (L) | 37 | ||
TCG (S) = > TTG (L) | 19 | ||
ACC (T) = > ATC (I) | 3 | ||
ACT (T) = > ATT (I) | 2 | ||
ACA (T) = > ATA (I) | 1 | ||
ACG (T) = > ATG (M) | 2 | ||
hydrophilic-stop | CAA (Q) = > TAA (X) | 1 | 0.93% |
CGA (R) = > TGA (X) | 1 |