Skip to main content

Table 1 T. fracticalcis DRI-13T Hybrid genome assembly comparison

From: Hybrid genome de novo assembly with methylome analysis of the anaerobic thermophilic subsurface bacterium Thermanaerosceptrum fracticalcis strain DRI-13T

Assembler

Assembly Size

Contigs

Largest Contig Length

GC Percentage

Ambiguous Base Count

Predicted Gene Count

Unicyclera

3,805,411

1

3,805,411

45.2%

0

2216

Flye

3,762,930

1

3,762,930

45.2%

0

2230

Canu

3,746,854

1

3,746,854

45.3%

0

2610

MaSuRCA

3,734,429

5

3,730,424

45.2%

100

2247

Spades-hybrid

3,917,015

171

3,697,741

45.0%

24,644

2254

SPAdes Illumina only

5,294,664

2060

192,791

42.2%

110

2933

Scaffold genome assemblyb

3,649,665

105

193,268

45.1%

265

2209

  1. aThis work
  2. bInformation acquired from Hamilton-Brehm et al. 2019 [1]