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Fig. 2 | BMC Genomics

Fig. 2

From: Diversity of short interspersed nuclear elements (SINEs) in lepidopteran insects and evidence of horizontal SINE transfer between baculovirus and lepidopteran hosts

Fig. 2

The consensus sequences of PxSE1, PxSE2, PxSE3, PxSE4 and PxSE5. BmSEm, SINE2-1_PXu and HaSE3 sequences were obtained from Repbase database. tRNA and 5S rRNA sequences were downloaded from D. melanogaster tRNAArg sequence (Accession number: V00243) and B. mori (Accession number: K03316), respectively. a PxSE1 and PxSE2 consensus sequences aligned with tRNA sequence and BmSE. Nucleotides shaded in black are conserved across sequences. The underlined sequences of A Box and B Box are the RNA pol III promoter sequences. b PxSE3 consensus sequence aligned with tRNA-related region and conserved central domain of SINE2-1_PXu. c PxSE4, PxSE5 consensus sequences aligned with 5S rRNA and 3′-region of PxLINE1.1. PxLINE1.1 is a new LINE transposon in P. xylostella

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BMC Genomics

ISSN: 1471-2164

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