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Table 1 SNP inclusion/exclusion summary from the Illumina Infinium 20 K array

From: Integration of Infinium and Axiom SNP array data in the outcrossing species Malus × domestica and causes for seemingly incompatible calls

Classification

n

Included in this study

Retained from original 15,517 SNP iGL map

9685

Successfully placed via physical information

610

Total:

10,295

Excluded from this study

Poor clustering

4582

Overlapping null and homozygous clusters

2604

Monomorphic

382

Extra cluster(s) causing illogical segregation

90

Not included in iGL map, no physical location

60

Illogical segregation

6

Total:

7724