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Table 1 Summary of within-gene significant SNPs for FCR trait

From: Genome-wide association and transcriptome studies identify candidate genes and pathways for feed conversion ratio in pigs

SNP ID bp (SSC10.2) bp (SSC11.1) Pvalue Genes
rs80841312 36,496,185 33,897,913 4.39E-07 CCT2
rs80786392 36,510,853 33,912,700 4.51E-07 BEST3 CCT2
rs80837106 36,589,679 33,991,092 4.51E-07 CCT2
rs80845463 36,621,274 34,022,700 4.51E-07 CCT2
rs81383707 36,721,314 34,122,773 4.54E-07 MYRFL
rs80964888 36,532,511 33,934,311 4.72E-07 BEST3 CCT2
rs332237334 36,353,885 33,842,149 4.79E-07 FRS2
rs81344478 36,357,722 33,838,344 4.79E-07 FRS2
rs80850598 37,318,776 34,747,588 4.93E-07 PTPRB
rs81287625 36,826,851 34,177,721 5.25E-07 MYRFL
rs345043801 36,469,745 33,871,482 6.03E-07 CCT2
rs80785563 36,544,839 33,946,621 6.03E-07 BEST3 CCT2
rs80989707 36,568,996 33,970,407 6.35E-07 CCT2
rs339913443 38,629,120 35,929,672 6.61E-07 TPH2
rs80835055 36,838,800 34,189,654 7.00E-07 MYRFL
rs81000718 37,249,647 34,677,764 7.01E-07 PTPRB
rs80892229 37,369,531 34,769,398 7.44E-07 PTPRB
rs323754097 39,138,147 36,346,640 9.75E-07 TRHDE
rs81383732 38,337,110 35,634,440 1.01E-06 ZFC3H1
rs80811321 34,095,144 30,820,701 1.26E-06 GRIP1
rs81323542 47,441,081 44,096,325 1.37E-06 TMTC1
rs81212454 42,358,084 38,794,710 1.46E-06 GLIPR1 KRR1
rs81383891 42,378,400 38,815,027 1.46E-06 GLIPR1 KRR1
rs81331039 47,398,882 44,127,767 1.49E-06 TMTC1
rs81331835 47,404,818 44,121,830 1.49E-06 TMTC1
rs81383984 47,782,626 44,464,360 1.58E-06 FAR2