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Fig. 1 | BMC Genomics

Fig. 1

From: Identification of co-expression network correlated with different periods of adipogenic and osteogenic differentiation of BMSCs by weighted gene co-expression network analysis (WGCNA)

Fig. 1

Data processing and procedure of WGCNA. a Box plot of sequencing depth analysis for unnormalised and normalised data. Normalised data shows closer sequencing depth. b Gene expression level distribution of raw and filtered data. Extremely low expressed genes are filtered. c, d Hierarchical clustering and PCA to detect outlier sample. e Determination of best soft thresholding power for WGCNA. The green line corresponding to 0.9. Twenty-two is selected based on the consideration of both scale independence and mean connectivity. WGCNA, the weighted gene co-expression network analysis. PCA, principal component analysis

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BMC Genomics

ISSN: 1471-2164

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