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Fig. 4 | BMC Genomics

Fig. 4

From: Genomic analysis of novel Yarrowia-like yeast symbionts associated with the carrion-feeding burying beetle Nicrophorus vespilloides

Fig. 4

Phylogenetic tree of Yarrowia-like yeasts. The tree was constructed in EDGAR [31] based on the amino acid sequences of the “Yarrowia core genome” using FastTree 2.8.1 with default settings. The core genome includes the common set of genes shared by Y. yakushimensis, Y. porcina, Y. phangngaensis, Y. osloensis, Y. hollandica, Y. galli, Y. divulgata, Y. deformans, Y. bubula, Y. alimentaria, Yarrowia sp. JCM 30695, Yarrowia sp. JCM 30696, Yarrowia sp. JCM 30694, Y. keelungensis and 2 Y. lipolytica strains. This gene set is composed of 3542 genes. The five yeast strains we investigated are highlighted in bold. The scale displays substitutions per site. Local branch support values were computed with the Shimodaira-Hasegawa test [32]

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BMC Genomics

ISSN: 1471-2164

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