Table 1 High quality (HQ) and medium quality (mq) single-contig MAGs retrieved in each metagenome assembly. Taxonomy assigned using the GTDB database release 95. Q is the MAG quality. Cov. is the coverage from Flye. *Blautia_A sp900541345 and *g__Sutterella HQ MAGs after correction of the indels
From: Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces
Taxonomy (GTDB) | HMW data | 100% data | 75% data | 50% data | ||||
|---|---|---|---|---|---|---|---|---|
Q | Cov. | Q | Cov. | Q | Cov. | Q | Cov. | |
HQ MAG | ||||||||
 g__Succinivibrio | HQ | 47X | HQ | 101X | mq | 82X | HQ | 50X |
 g__Sutterella* | mq | 95X | mq | 159X | HQ | 123X | mq | 87/80X |
 Prevotellamassilia sp900541335 | HQ | 394X | HQ | 577X | HQ | 430X | HQ | 282X |
 Phascolarctobacterium sp900544885 | HQ | 87X | HQ | 205X | HQ | 155X | mq | 98X |
 Catenibacterium sp000437715 | HQ | 13X | mq | 24X | HQ | 17X | mq | 11X |
 Blautia_A sp003287895 | – | – | mq | 38X | HQ | 31X | mq | 18X |
 Enterococcus_B hirae | HQ | 17X | HQ | 42X | HQ | 31X | HQ | 22X |
 Blautia_A sp900541345* | HQ | 44X | – | – | mq | 45X | – | – |
MQ MAG | ||||||||
 Phocaeicola plebeius | mq | 126X | mq | 234X | mq | 168X | – | – |
 g__Bacteroides | mq | 206X | mq | 368X | mq | 282X | mq | 196X |
 g__Phocaeicola | – | – | mq | 271X | – | – | – | – |