Table 3 Prevalence of the bacterial species identified in public microbiome surveys. For human-derived MAGs, the Unified Human Gut Genome database was used [36]. For animal-derived MAGs, the animal gut metagenome catalog [10] was used. If no MAG belonged to that bacterial species, we further screened GTDB [29]. For further detail on 16S rRNA gene phylogenies, see Additional File 6.
From: Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces
HQ MAG | Dog | Human | Other animals | Closest 16S | Main host |
|---|---|---|---|---|---|
Blautia_A sp900541345 | 35 | 1 | 0 | Human gut | Dog |
Phascolarctobacterium sp900544885 | 12 | 1 | 0 | Dog gut | Dog |
Prevotellamassilia sp900541335 | 7 | 1 | 0 | Wolves’ gut | Canids |
g__Succinivibrio | 1 | 0 | 0 | Wolves’ gut | Canids |
Catenibacterium sp000437715 | 27 | 691 | 2 | Human gut | Human, animal |
Enterococcus_B hirae | 1 | 35 | 3 | Multiple | Human, animal |
Blautia sp003287895 | 1 | 6 | 1 | Dog gut | Human, animal |
g__Sutterella | 0 | 1 | 0 | Multiple carnivora | Human, animal |