Table 1 Characteristics of RNA-seq data
Samples | Clean reads (M) | Clean bases (Gb) | GC Content (%) | Q30 (%) |
|---|---|---|---|---|
non-infected rainbow trout 1 | 26.9191 | 8.0181 | 49.14 | 93.18 |
non-infected rainbow trout 2 | 23.4555 | 6.9991 | 49.64 | 93.55 |
non-infected rainbow trout 3 | 25.5238 | 7.6123 | 49.33 | 93.15 |
YR-infected rainbow trout 1 | 22.5961 | 6.7523 | 49.18 | 92.87 |
YR-infected rainbow trout 2 | 23.5341 | 7.0248 | 49.00 | 93.43 |
YR-infected rainbow trout 3 | 25.7487 | 7.6694 | 49.18 | 93.32 |
Non-infected group | 75.8984 | 22.6295 | 49.32 | 93.29 |
YR-infected group | 72.0286 | 21.4465 | 49.12 | 93.21 |
Total | 147.927 | 44.076 | 49.25 | 93.25 |