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Table 5 P-value test on protein complexes identified by different algorithms

From: Protein functional module identification method combining topological features and gene expression data

Data Set

Algorithms

Average-log(P-value)

<1E-15

<1E-10

<1E-5

<1E-2

DIP

ECTG

12.3

34.88%

53.50%

83.31%

94.66%

 

GMFTP

9.6

14.63%

27.9%

55.92%

76.79%

 

MCL

6.67

7.36%

10.66%

31.07%

61.83%

 

ClusterONE

7.99

11.12%

25.83%

58.76%

80.96%

 

CFinder

6.85

5.16%

13.57%

35.24%

67.54%

 

DPClus

4.45

0.78%

4.01%

12.35%

33.56%

 

COACH

7.85

11.65%

24.06%

47.27%

82.36%

Krogan

ECTG

13.32

32.87%

49.78%

76.55%

89.64%

 

GMFTP

8.70

17.52%

36.24%

64.25%

70.48%

 

MCL

5.09

7.26%

13.79%

44.25%

69.21%

 

ClusterONE

8.13

19.9%

36.7%

69.8%

87.4%

 

CFinder

6.3

4.23%

11.04%

31.56%

58.90%

 

DPClus

5.58

2.67%

5.98%

15.86%

36.82%

 

COACH

9.25

15.86%

26.12%

49.25%

79.35%

Gavin

ECTG

13.67

43.52%

64.13%

85.86%

94.59%

 

GMFTP

9.2

31.8%

52.86%

83.17%

92.13%

 

MCL

6.23

23.56%

36.27%

65.08%

79.84%

 

ClusterONE

8.26

21.6%

32.3%

61.7%

90.6%

 

CFinder

5.96

3.89%

10.56%

29.56%

52.13%

 

DPClus

6.03

5.17%

10.23%

20.59%

42.26%

 

COACH

9.96

16.23%

27.26%

48.56%

78.64%