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Table 3 Genes encoding proteins involved in catabolic activity, plant growth promoting activity, transport and cold adaptation predicted in the genome of G. arilaitensis LJH19

From: Comparative genomics and physiological investigation supported safety, cold adaptation, efficient hydrolytic and plant growth-promoting potential of psychrotrophic Glutamicibacter arilaitensis LJH19, isolated from night-soil compost

Category and GenBank ID

Description

Category and GenBank ID

Description

Catabolic activity

Plant Growth Promoting activity

TFH56992, TFH56993

ATP-dependent Clp protease proteolytic subunit

TFH55608, TFH57060

amidase

TFH56994

ATP-dependent Clp protease ATP-binding subunit ClpX

TFH56909

Anthranilate synthase component I

TFH54429

Putative esterase

TFH56082

Nitrite reductase [NAD(P)H]

TFH56413

pullulanase-type alpha-1,6-glucosidase

TFH56083

nitrite reductase (NAD(P)H) small subunit

TFH57366

trypsin-like serine protease

TFH56086

nitrite reductase

TFH56438

MarP family serine protease

TFH57000

nitrite/sulfite reductase

TFH57809

Alpha-amylase

TFH55619

nitrate reductase

TFH54465

alpha/beta fold hydrolase

TFH56511

Isochorismate synthase

TFH54414

Beta-glucosidase

TFH57125

chorismate synthase

TFH54614

Xylose isomerase

TFH57182

Anthranilate phosphoribosyl transferase

Transporters

 

TFH57559, TFH55965

Isochorismatase family protein YecD

TFH56366

spermidine/putrescine ABC transporter substrate-binding protein

TFH55761

Acetylornithine aminotransferase

TFH54902, TFH55612, TFH56015, TFH56106, TFH56479, TFH56632, TFH56864, TFH57051, TFH57718

amino acid permease

TFH54544

alkaline phosphatase

TFH56389

amino acid ABC transporter ATP-binding protein

TFH54792

Inositol-1-monophosphatase

TFH55562

phosphate ABC transporter ATP-binding protein

TFH56913

tryptophan synthase subunit beta

TFH55563

phosphate ABC transporter permease PstA

TFH56914

tryptophan synthase subunit alpha

TFH55564

phosphate ABC transporter permease subunit PstC

TFH56912

indole-3-glycerol phosphate synthase TrpC

TFH55565, TFH57701

phosphate ABC transporter substrate-binding protein PstS

TFH55232

Ornithine carbamoyltransferase

TFH55134

phosphate/phosphite/phosphonate ABC transporter substrate-binding protein

TFH56276

ornithine decarboxylase

TFH55132

phosphonate ABC transporter, permease protein PhnE

TFH55236

Argininosuccinate lyase

TFH55133

phosphonate ABC transporter ATP-binding protein

TFH55205

Phosphoribosyl anthranilate isomerase PriA

TFH56773

peptide ABC transporter substrate-binding protein

TFH56212

Formimidoyl glutamase* (Arginase)

TFH54587

aliphatic sulfonate ABC transporter substrate-binding protein

TFH54789

agmatinase

TFH54588

ABC transporter permease

TFH55596

inorganic diphosphatase

TFH55268

short-chain fatty acid transporter

TFH56916

glutamate synthase subunit beta

TFH56023

D-serine/D-alanine/glycine transporter

TFH57767

glutamate synthase large subunit

TFH55620, TFH56087

MFS transporter (nitrate)

TFH56292

FMN-binding glutamate synthase family protein

TFH56177

gluconate permease

TFH56820

Glutamine synthetase

TFH55044

iron-enterobactin ABC transporter permease

  

TFH55045

Fe(3+)-siderophore ABC transporter permease

  

TFH54561, TFH54802

siderophore-interacting protein

  

TFH54562

Fe2+-enterobactin ABC transporter substrate-binding protein

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