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Table 3 Top 15 enriched pathways associated with differentially expressed homoeologous genes related to metabolism in herbivorous diet group compared with carnivorous diet group

From: Asymmetric expression of homoeologous genes contributes to dietary adaption of an allodiploid hybrid fish derived from Megalobrama amblycephala (♀) × Culter alburnus (♂)

Pathway in intestine transcriptome Gene NO. Reference NO. P value Pathway ID
Biosynthesis of antibiotics 109 459 1.43E-13 ko01130
PPAR signaling pathway 40 134 1.13E-08 ko03320
Carbon metabolism 59 240 1.60E-08 ko01200
Steroid biosynthesis 19 40 2.02E-08 ko00100
Fat digestion and absorption 27 75 3.65E-08 ko04975
Biosynthesis of secondary metabolites 138 757 4.06E-08 ko01110
Cholesterol metabolism 33 111 2.36E-07 ko04979
Glycine, serine and threonine metabolism 28 86 2.39E-07 ko00260
Cysteine and methionine metabolism 28 87 3.14E-07 ko00270
Biosynthesis of amino acids 42 165 6.80E-07 ko01230
Fatty acid biosynthesis 15 34 2.06E-06 ko00061
Proximal tubule bicarbonate reclamation 19 53 4.09E-06 ko04964
Protein digestion and absorption 53 244 5.08E-06 ko04974
Glycolysis / Gluconeogenesis 32 129 2.46E-05 ko00010
Citrate cycle (TCA cycle) 19 62 5.23E-05 ko00020
Pathway in liver transcriptome Gene NO. Reference NO. P value Pathway ID
Biosynthesis of antibiotics 80 459 2.85E-15 ko01130
Metabolic pathways 257 2479 8.47E-14 ko01100
Biosynthesis of secondary metabolites 103 757 4.59E-12 ko01110
Steroid biosynthesis 16 40 2.40E-09 ko00100
Glycine, serine and threonine metabolism 22 86 4.08E-08 ko00260
FoxO signaling pathway 47 303 7.83E-08 ko04068
Insulin signaling pathway 49 323 8.44E-08 ko04910
Cysteine and methionine metabolism 21 87 2.42E-07 ko00270
PPAR signaling pathway 27 134 2.68E-07 ko03320
Cholesterol metabolism 24 111 3.14E-07 ko04979
AMPK signaling pathway 44 298 8.28E-07 ko04152
Terpenoid backbone biosynthesis 14 46 1.24E-06 ko00900
Glyoxylate and dicarboxylate metabolism 17 68 1.99E-06 ko00630
Carbon metabolism 35 240 1.43E-05 ko01200
Adipocytokine signaling pathway 27 169 2.64E-05 ko04920