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Table 5 List of samples, their codes, and corresponding sampling heights of tissues collected for RNA-seq analysis

From: Reproductive developmental transcriptome analysis of Tripidium ravennae (Poaceae)

Tissue Sample code Plant Aw
(cm)
Sample code Plant Bw
(cm)
Sample code Plant Cw
(cm)
Inflorescence development tissuesx
 VM (Vegetative meristem) VMA 0 VMB 0 VMC 0
 20P (~ 20 cm) meristem 20PA 16 20 PB 21 20PC 13
 40P (~ 40 cm) meristem 40PA 25 40 PB 40 40PC 44
 80P (~ 80 cm) meristem 80PA 60 80 PB 106 80PC 70
 120P (~ 120 cm) meristem 120PA 133 120 PB 121 120PC 120
 160P (~ 160 cm) meristem 160PA 170 160 PB 157 160PC 170
 200P (~ 200 cm) meristem 200PA 203 200 PB 193 200PC 198
Floral development tissuesy
 FT (boot stage florets) FTA n/a FTB n/a FTC n/a
 PAF (pre-anthesis florets) PAFA n/a PAFB n/a PAFC n/a
 ANT (Florets at anthesis) ANTA n/a ANTB n/a ANTC n/a
 ST (Stamens) STA n/a STB n/a STC n/a
Seed development tissuesz
 IS (Immature seeds) ISA n/a ISB n/a ISC n/a
 MS (Mature seeds) MSA n/a MSB n/a MSC n/a
  1. wMeasurements are the actual distance (cm) from the base of the culm to the inflorescence node subtending the meristem for each sample
  2. x20P, 40P, 80P, 120P, 160P, and 200P represented six sampling groups for inflorescence development and grouped by the approximate distance from the base of the culm where those samples were collected
  3. yFT, floral spikelet tissue excised from boot stage inflorescences. PAF, floral spikelet tissues sampled from mature inflorescences before stigma extrusion from the palea and lemma. ANT, samples at the stage of floret development where stigmas were pollen receptive and bright red. ST, samples of fresh dehiscent anther tissues
  4. zIS, samples of floret tissue approximately one-two weeks post-anthesis. MS, mature florets