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Fig. 3 | BMC Genomics

Fig. 3

From: Transcriptional profile of oil palm pathogen, Ganoderma boninense, reveals activation of lignin degradation machinery and possible evasion of host immune response

Fig. 3

Heatmap for CAZymes that were differentially expressed in planta. The expression pattern of CAZymes belonging to five families, auxiliary activities (AA), carbohydrate binding modules (CBM), carbohydrate esterases (CE), glycoside hydrolases (GH) and polysaccharide lyases (PL) is shown here. Columns labelled as C and T represent the two growth conditions, i.e., G. boninense growing in vitro on artificial medium, and G. boninense interacting with oil palm host (in planta), respectively. Gene expression level, expressed as Z-scores calculated from normalized expression values, for each gene is color coded, with red and blue being up- and down-regulated genes, respectively. Rows (genes) were clustered hierarchically

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BMC Genomics

ISSN: 1471-2164

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