DNA methylation-based sex classifier to predict sex and identify sex chromosome aneuploidy

BMC Genomics

Table 2 Samples with verified or suspect abnormal karyotypes from GEO

Sample ID	Karyotype	Verified karyotype?	Source tissue	Disease status	Reference
GSM1566904	45,XO	Yes	Peripheral Blood	Turner syndrome	[22]
GSM1566905	45,XO	Yes	Peripheral Blood	Turner syndrome	[22]
GSM1566906	45,XO	Yes	Peripheral Blood	Turner syndrome	[22]
GSM1566907	45,XO	Yes	Peripheral Blood	Turner syndrome	[22]
GSM1572595	45,XO	Yes	Whole Blood	Turner syndrome	[23]
3999215192_R06C02	47,XXY	Yes	Prefrontal cortex	Schizophrenia and Klinefelters syndrome	[24]
GSM3562874 (GSM3667736)^*	47,XXY	No	Whole blood		[25]
GSM1649023	47,XXY	No	Whole blood		[26]
GSM1946555	47,XXY	No	Whole Blood	Post-traumatic stress disorder	[27]
GSM3662121	47,XXY	No	Blood	Lynch-like syndrome	NA
GSM1344329	47,XXY	No	Peripheral blood		[28]
GSM2336820	47,XXY	No	CD8+ T-cells	Ulcerative colitis	[29]
GSM3680912	47,XXY	No	Frontal cortex	Schizophrenia	[30]
GSM1496810	47,XXY	No	Frontal cortex	Schizophrenia	[31]

ISSN: 1471-2164