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Fig. 1 | BMC Genomics

Fig. 1

From: Evaluation of tools for identifying large copy number variations from ultra-low-coverage whole-genome sequencing data

Fig. 1

Flowchart showing the main steps of our comparison, including preprocessing of the data, detection of copy number variations (CNVs) with six different algorithms (BIC-seq2, Canvas, CNVnator, FREEC, HMMcopy, and QDNAseq) and evaluation and validation of the results. The karyotyping results from the KaryoLiteTM BoBsTM assay are from an earlier study [9]

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BMC Genomics

ISSN: 1471-2164

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