Table 6 Annotation of genes present in co-expression network

Type-I

Glyma.14G066800

AT-hook motif nuclear-localized protein 15

DNA-binding transcription factor activity

Glyma.09G199800

AP2-like ethylene-responsive transcription factor AIL6

DNA binding

Glyma.20G095500

DUF724 domain-containing protein 3

histone binding

Glyma.17G136600

AT-hook motif nuclear-localized protein 24

DNA-binding transcription factor activity

Glyma.01G165000

alpha-mannosidase

alpha-mannosidase activity

Glyma.09G163500

NA

NA

Glyma.02G281500

alpha-amylase inhibitor/lipid transfer/seed storage family protein

NA

Glyma.13G260800

NA

NA

Glyma.10G128200

HVA22-like protein e

6-phosphofructokinase activity

Glyma.05G054200

AT-hook motif nuclear-localized protein 24

DNA-binding transcription factor activity

Glyma.19G118400

WUSCHEL-related homeobox 11

DNA binding

Glyma.18G063900

NA

NA

Glyma.09G090600

uncharacterized LOC100790863

NA

Glyma.14G096300

pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta

6-phosphofructokinase activity

Glyma.08G080200

berberine bridge enzyme-like 8

FAD binding

Glyma.03G192700

NA

ATP binding

Glyma.03G088300

NA

NA

Glyma.07G170100

NA

NA

Glyma.17G166500

UDP-glycosyltransferase 84B2

quercetin 3-O-glucosyltransferase activity

Glyma.14G028600

AT-hook motif nuclear-localized protein 16

DNA-binding transcription factor activity

Glyma.04G005900

5′-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2

catalytic activity

Glyma.20G212200

AT-hook motif nuclear-localized protein 6

DNA binding

Glyma.06G005700

5′-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1

catalytic activity

Glyma.06G005600

5′-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1-like

catalytic activity

Glyma.10G178000

AT-hook motif nuclear-localized protein 6

DNA binding

Glyma.09G153600

AT-hook motif nuclear-localized protein 6

DNA binding

Glyma.16G204400

AT-hook motif nuclear-localized protein 7

DNA binding

Glyma.20G039300

AT-hook motif nuclear-localized protein 28

DNA-binding transcription factor activity

Glyma.06G130400

NA

NA

Glyma.08G357100

NA

cell fate determination

Glyma.09G055200

NA

NA

Glyma.08G358000

NA

NA

Glyma.14G182200

NA

NA

Glyma.03G075700

GDP-mannose transporter GONST3

antiporter activity

Glyma.09G058200

defensin-like protein 183

Fungicide

Glyma.20G067800

NA

hydrolase activity

Glyma.08G350700

putative E3 ubiquitin-protein ligase RING1b

Metal-binding

Glyma.05G071500

uncharacterized LOC106798883

NA

Glyma.13G262900

F-box/FBD/LRR-repeat protein At3g14710

F-box domain-containing protein

Glyma.02G104800

scopoletin glucosyltransferase

UDP-glycosyltransferase activity

Glyma.19G053600

uncharacterized LOC106797433

mitochondrial cytochrome c oxidase assembly

Glyma.19G092600

pectinesterase inhibitor-like

pectinesterase inhibitor activity

Glyma.20G063400

NA

NA

Glyma.10G125600

NA

NA

Glyma.10G294000

high mobility group B protein 15

DNA binding

Glyma.02G113200

NA

transferase activity

Glyma.08G350700

putative E3 ubiquitin-protein ligase RING1b

Metal-binding

Glyma.17G188200

beta-glucosidase BoGH3B

beta-glucosidase activity

Glyma.08G235200

LBD domain-containing transcription factor

LOB domain-containing protein

Type-II

Glyma.20G212200

AT-hook motif nuclear-localized protein 6

DNA binding

Glyma.05G140400

DELLA protein GAI 1

gibberellic acid mediated signaling pathway

Glyma.02G285500

AT-hook motif nuclear-localized protein 16

DNA-binding transcription factor activity

Glyma.08G095800

DELLA protein GAI1

gibberellic acid mediated signaling pathway

Glyma.06G150000

carbamoyl-phosphate synthase small chain, chloroplastic

carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity

Glyma.14G028600

AT-hook motif nuclear-localized protein 16

DNA-binding transcription factor activity

Glyma.05G207300

AT-hook motif nuclear-localized protein 5-like

DNA binding

Glyma.03G011200

AT-hook motif nuclear-localized protein 9

DNA binding

Glyma.08G014000

AT-hook motif nuclear-localized protein 5

DNA binding

Glyma.17G155200

NA

DNA binding

Glyma.10G148800

importin subunit alpha-2

NLS-bearing protein import into nucleus

Glyma.01G219600

AT-hook motif nuclear-localized protein 5

DNA binding

Glyma.15G144800

importin subunit alpha-2

NLS-bearing protein import into nucleus

Glyma.05G053800

AT-hook motif nuclear-localized protein 1

DNA binding

Glyma.09G153600

AT-hook motif nuclear-localized protein 6

DNA binding

Glyma.09G105600

carbon catabolite repressor protein 4 homolog 1

poly(A)-specific ribonuclease activity

Glyma.03G207300

carbon catabolite repressor protein 4 homolog 1

poly(A)-specific ribonuclease activity

Glyma.02G169700

NA

poly(A)-specific ribonuclease activity

Glyma.05G111800

AT-hook motif nuclear-localized protein 13

DNA binding

Glyma.19G204800

carbon catabolite repressor protein 4 homolog 1

poly(A)-specific ribonuclease activity

Glyma.07G072300

AT-hook motif nuclear-localized protein 9

DNA binding

Glyma.11G042900

AT-hook motif nuclear-localized protein 8

DNA binding

Glyma.01G198900

AT-hook motif nuclear-localized protein 8

DNA binding

Glyma.17G136200

AT-hook motif nuclear-localized protein 1

DNA binding

Glyma.09G260600

uncharacterized LOC100814615

DNA binding

Glyma.18G231300

AT-hook motif nuclear-localized protein 9

DNA binding

Glyma.16G204400

AT-hook motif nuclear-localized protein 7

DNA binding

Glyma.07G153700

BAG family molecular chaperone regulator 4

adenyl-nucleotide exchange factor activity

Glyma.01G123300

BAG and ubiquitin domain-containing protein

adenyl-nucleotide exchange factor activity

Glyma.09G039600

mportin subunit alpha-2

NLS-bearing protein import into nucleus

Glyma.17G031000

importin subunit alpha-2

NLS-bearing protein import into nucleus

Glyma.03G051600

BAG family molecular chaperone regulator 4

adenyl-nucleotide exchange factor activity

Glyma.03G208600

uncharacterized LOC102667761

BRCT domain-containing protein

Glyma.20G239200

importin subunit alpha-2

NLS-bearing protein import into nucleus

Glyma.06G075100

glucan endo-1,3-beta-glucosidase 5

glucan endo-1,3-beta-D-glucosidase activity

Glyma.07G132100

kinesin-like protein KIN-10B

ATP binding

Glyma.11G023900

AT-hook motif nuclear-localized protein 5

DNA binding

Type-III

Glyma.17G136200

AT-hook motif nuclear-localized protein 1

DNA binding

Glyma.03G179700

zinc finger protein JACKDAW

DNA-binding transcription factor activity

Glyma.13G139000

zinc finger protein JACKDAW

DNA-binding transcription factor activity

Glyma.12G055600

DNA damage-repair/toleration protein DRT100

NA

Glyma.10G051500

zinc finger protein JACKDAW

DNA-binding transcription factor activity

Glyma.19G180400

zinc finger protein JACKDAW

DNA-binding transcription factor activity

Glyma.17G257500

HVA22-like protein i

NA

Glyma.18G279800

putative GDSL/SGNH-like acyl-esterase family protein

O-acetyltransferase activity

Glyma.11G179200

receptor protein kinase TMK1

ATP binding

Glyma.06G122200

sugar efflux transporter SWEET13

sugar transmembrane transporter activity

Glyma.09G260600

uncharacterized LOC100814615

DNA binding

Glyma.11G042900

AT-hook motif nuclear-localized protein 8

DNA binding

Glyma.05G111800

AT-hook motif nuclear-localized protein 13

DNA binding

Glyma.07G072300

AT-hook motif nuclear-localized protein 9

DNA binding

Glyma.17G155200

NA

DNA binding

Glyma.16G204400

AT-hook motif nuclear-localized protein 7

DNA binding

Glyma.01G198900

AT-hook motif nuclear-localized protein 8

DNA binding

Glyma.03G011200

AT-hook motif nuclear-localized protein 9

DNA binding

Glyma.18G231300

AT-hook motif nuclear-localized protein 9

DNA binding

Glyma.03G258300

auxin response factor 18

auxin-activated signaling pathway

Glyma.09G243200

uncharacterized LOC100807657

mRNA binding

Glyma.02G285500

AT-hook motif nuclear-localized protein 16

DNA-binding transcription factor activity

Glyma.08G095800

DELLA protein GAI1

DNA-binding transcription factor activity

Glyma.06G164800

mediator of RNA polymerase II transcription subunit 36a

histone-glutamine methyltransferase activity

Glyma.05G140400

DELLA protein GAI 1

gibberellic acid mediated signaling pathway

Glyma.14G028600

AT-hook motif nuclear-localized protein 16

DNA-binding transcription factor activity

Glyma.09G196600

uncharacterized LOC100813911

GTPase activity

Glyma.04G084200

probable transcriptional regulatory protein At2g25830

NA

Glyma.19G249200

AT-hook motif nuclear-localized protein 14

DNA binding

Glyma.02G272200

abscisic-aldehyde oxidase

Metal binding

Glyma.18G220900

AT-hook motif nuclear-localized protein 1

DNA binding

Glyma.09G248700

UPF0510 protein INM02-like

NA

Glyma.11G225500

UDP-glycosyltransferase 76B1

quercetin 3-O-glucosyltransferase activity

Glyma.13G150600

AT-hook motif nuclear-localized protein 1

DNA binding

Glyma.13G237200

glyoxysomal processing protease, glyoxysomal

serine-type endopeptidase activity

Glyma.18G010900

E3 ubiquitin-protein ligase AIRP2

ubiquitin protein ligase activity

Glyma.06G142100

WRKY transcription factor 55

DNA-binding transcription factor activity

Glyma.07G201900

FHA domain-containing protein At4g14490

mRNA binding

Glyma.03G139900

NA

NA

Glyma.11G059900

cell division cycle-associated 7-like protein

regulation of transcription

Glyma.17G112700

ABC transporter F family member 4

ATP binding

Glyma.05G151900

protein RALF-like 24

calcium-mediated signaling

Glyma.04G139900

U3 small nucleolar ribonucleoprotein protein IMP4-like

snoRNA binding

Glyma.03G257500

cytochrome b561 and DOMON domain-containing protein At3g61750

NA