Table 1 Sample sizes and summary statistics comparing strain genotypes against the C57BL/6J reference genome, including the mean, minimum, and maximum number of SNPs that were homozygous for the alternate allele (i.e., not the C57BL/6J allele) as well as mean, minimum, and maximum percentage of C57BL/6J alleles
Strain | Source | Number of homozygous alternate SNPs | % C57BL/6J alleles | ||||
|---|---|---|---|---|---|---|---|
Mean | Min | Max | Mean | Min | Max | ||
C57BL/6J | Jackson Laboratory (Cat# 000664) | 1 | 1 | 1 | 99.9 | 99.9 | 99.9 |
BALB/c-AnNHsd | Envigo | 845 | 840 | 851 | 46.8 | 46.7 | 46.8 |
BALB/c-IL4/IL13 | Jackson Laboratory (Cat# 015859) | 836 | 830 | 842 | 46.9 | 46.7 | 47.1 |
C57BL/6N-Crl | Charles River | 142 | 141 | 142 | 91.1 | 91.1 | 91.2 |
C57BL/6N-Hsd | Envigo | 126 | 125 | 127 | 92.1 | 92.0 | 92.1 |