Table 4 Mean assembly statistics (C₃₀ at each enrichment time) for each assembly approach

metaFlye (long read)

40.6

4,291,417

27

3,056,133

3,056,133

Canu (long read)

98

3,470,967

21

1,754,979

2,071,553

Redbean (long read)

1

3,474,503

35

2,123,769

2,131,343

MegaHit (short read)

32.8

7,972,605

7315

97,577

672,182

metaFlye+Racon (long read)

41.6

4,261,624

27

3,039,238

3,039,238

HybridSpades (short read hybrid)

22.6

11,681,048

19,285

112,850

686,270

OperaMS (no reference) (short read hybrid)

12.2

10,340,211

13,921

105,382

655,220

OperaMS (reference) (short read hybrid)

13.6

10,363,273

13,913

205,943

1,919,416

metaFlye+Racon+Pilon (long read hybrid)

41.6

4,271,759

27

3,041,086

3,041,086

metaFlye+Racon+ntEdit (long read hybrid)

41.6

4,274,358

27

3,041,440

3,041,440