Table 1 Descriptive statistics of CNV and CNV length for each population
From: Detection of copy number variants in African goats using whole genome sequence data
Population | Number of samples | CNV | CNV length (bp) | ||||
|---|---|---|---|---|---|---|---|
State | Number | Mean | Median | Minimum | Maximum | ||
BOE | 9 | Loss | 9079 | 2227.1 | 1326 | 67 | 254,129 |
Gain | 331 | 20,165.9 | 1500 | 161 | 631,262 | ||
Overall | 9410 | 2858.1 | 1330 | 67 | 631,262 | ||
EAF | 80 | Loss | 108,051 | 2244.7 | 1293 | 52 | 2,161,018 |
Gain | 3544 | 30,979.2 | 1316.5 | 118 | 2,777,398 | ||
Overall | 111,595 | 3157.2 | 1293 | 52 | 2,777,398 | ||
MAD | 27 | Loss | 31,426 | 2475.3 | 1295 | 84 | 2,069,909 |
Gain | 1078 | 28,384.1 | 1446 | 84 | 1,660,243 | ||
Overall | 32,504 | 3334.6 | 1296 | 84 | 2,069,909 | ||
SAF | 44 | Loss | 67,099 | 2368.9 | 1285 | 51 | 2,539,701 |
Gain | 2514 | 31,000.7 | 1192 | 101 | 1,959,154 | ||
Overall | 69,613 | 3402.9 | 1283 | 51 | 2,539,701 | ||
WAF | 22 | Loss | 29,221 | 2491.4 | 1280 | 52 | 2,457,795 |
Gain | 1210 | 40,255.3 | 1234 | 65 | 2,788,546 | ||
Overall | 30,431 | 3993 | 1280 | 52 | 2,788,546 | ||