From: Genomic epidemiology of SARS-CoV-2 in Esteio, Rio Grande do Sul, Brazil
GISAID Accession | Ct value | Collection month | Age range | Sex | Clinical status | Pangolin Lineage | Nextstrain Clade |
---|---|---|---|---|---|---|---|
EPI_ISL_831678 | 16.15 | May 2020 | 20–30 | M | Mild | B.1.1.33 | 20B |
EPI_ISL_831474 | 16.48 | June 2020 | 20–30 | M | Mild | B.1.1.33 | 20B |
EPI_ISL_831645 | 16.72 | June 2020 | 60+ | M | Moderate | B.1.1.248 | 20B |
EPI_ISL_831646 | 16.45 | June 2020 | 50–60 | F | Mild | B.1.1.33 | 20B |
EPI_ISL_831660 | 15.53 | June 2020 | 20–30 | F | Mild | B.1.1.248 | 20B |
EPI_ISL_831681 | 16.72 | July 2020 | 40–50 | F | Mild | B.1.1 | 19A |
EPI_ISL_831683 | 15.50 | July 2020 | 30–40 | F | Moderate | B.1.1.33 | 20B |
EPI_ISL_831685 | 16.65 | July 2020 | 10–20 | F | Mild | B.1.1.33 | 20B |
EPI_ISL_831688 | 15.52 | July 2020 | 40–50 | M | Mild | B.1.1.248 | 20B |
EPI_ISL_831689 | 14.37 | August 2020 | 30–40 | M | Mild | B.1.1.248 | 20B |
EPI_ISL_831892 | 15.12 | August 2020 | 60+ | M | Mild | B.1.1.33 | 20B |
EPI_ISL_831898 | 14.14 | August 2020 | 40–50 | M | Mild | B.1.1.33 | 20B |
EPI_ISL_831913 | 12.53 | August 2020 | 30–40 | F | Mild | B.1.1.49 | 20B |
EPI_ISL_831938 | 15.32 | August 2020 | 50–60 | M | Mild | B.1.1.248 | 20B |
EPI_ISL_831939 | 15.58 | September 2020 | 40–50 | M | Mild | B.1.1 | 20B |
EPI_ISL_831940 | 17.10 | September 2020 | 20–30 | F | Mild | B.1.1.33 | 20B |
EPI_ISL_832009 | 14.99 | September 2020 | 30–40 | F | Mild | B.1.1.248 | 20B |
EPI_ISL_832010 | 18.31 | October 2020 | 20–30 | F | Mild | B.1.1.248 | 20B |
EPI_ISL_832011 | 17.33 | October 2020 | 40 | M | Mild | B.1.1.248 | 20B |
EPI_ISL_832012 | 19.94 | October 2020 | 60+ | F | Mild | B.1.1.33 | 20B |
EPI_ISL_832013 | 18.15 | October 2020 | 40–50 | F | Mild | B.1.1 | 20B |